RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeastyeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIC1YLR039C TY1B-ER1Q03612 1755 aa2.05□□□□□ -2.08
RIC1YLR039C SCC2Q04002 1493 aa2.05□□□□□ -2.08
RIC1YLR039C TY1B-ML1Q04711 1755 aaKnown RBP2.05□□□□□ -2.08
RIC1YLR039C COQ11Q05892 277 aa2.05□□□□□ -2.08
RIC1YLR039C VTA1Q06263 330 aa2.05□□□□□ -2.08
RIC1YLR039C SMC4Q12267 1418 aa2.05□□□□□ -2.08
RIC1YLR039C TY1B-GR2Q12269 1755 aa2.05□□□□□ -2.08
RIC1YLR039C TY1B-OLQ12273 1755 aa2.05□□□□□ -2.08
RIC1YLR039C TY1B-PLQ12414 1755 aaKnown RBP2.05□□□□□ -2.08
RIC1YLR039C AIM17P23180 465 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C RRP7P25368 297 aaPredicted RBP2.04□□□□□ -2.08
RIC1YLR039C MCM4P30665 933 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C HCS1P34243 683 aa2.04□□□□□ -2.08
RIC1YLR039C SCO2P38072 301 aa2.04□□□□□ -2.08
RIC1YLR039C RHO4Q00246 291 aa2.04□□□□□ -2.08
RIC1YLR039C KAP120Q02932 1032 aa2.04□□□□□ -2.08
RIC1YLR039C CTL1Q03220 320 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C ATX2Q12067 313 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-LR1P0C2J3 1770 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-FP0CX63 1770 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-GR2P0CX64 1770 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-CP25384 1770 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-DR2Q03494 1770 aa2.04□□□□□ -2.08
RIC1YLR039C TY1B-DR1Q03855 1755 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-DR3Q07791 1770 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C TY2B-OR1Q12113 1770 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-DR1Q12472 1770 aa2.04□□□□□ -2.08
RIC1YLR039C TY2B-OR2Q12501 1770 aa2.04□□□□□ -2.08
RIC1YLR039C MYO4P32492 1471 aa2.04□□□□□ -2.08
RIC1YLR039C ECM5Q03214 1411 aa2.04□□□□□ -2.08
RIC1YLR039C TRM3Q07527 1436 aa2.04□□□□□ -2.08
RIC1YLR039C ATP10P18496 279 aa2.04□□□□□ -2.08
RIC1YLR039C TFB1P32776 642 aa2.04□□□□□ -2.08
RIC1YLR039C YKL023WP36103 277 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C DUG2P38149 878 aa2.04□□□□□ -2.08
RIC1YLR039C LAG1P38703 411 aa2.04□□□□□ -2.08
RIC1YLR039C APE4P38821 490 aa2.04□□□□□ -2.08
RIC1YLR039C TOM71P38825 639 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C YMR124WP39523 943 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C RTS2P40962 232 aa2.04□□□□□ -2.08
RIC1YLR039C PSA1P41940 361 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C CAK1P43568 368 aaPredicted RBP2.04□□□□□ -2.08
RIC1YLR039C ALK1P43633 760 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C BNA3P47039 444 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C FMS1P50264 508 aa2.04□□□□□ -2.08
RIC1YLR039C VTC3Q02725 835 aa2.04□□□□□ -2.08
RIC1YLR039C MMR1Q06324 491 aa2.04□□□□□ -2.08
RIC1YLR039C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
RIC1YLR039C PDH1Q12428 516 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C RPA190P10964 1664 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C MLP2P40457 1679 aa2.04□□□□□ -2.08
RIC1YLR039C MDH1P17505 334 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
RIC1YLR039C OPI1P21957 404 aa2.04□□□□□ -2.08
RIC1YLR039C CPR2P23285 205 aa2.04□□□□□ -2.08
RIC1YLR039C MGR1P25573 417 aa2.04□□□□□ -2.08
RIC1YLR039C GEX1P25596 615 aa2.04□□□□□ -2.08
RIC1YLR039C PHD1P36093 366 aa2.04□□□□□ -2.08
RIC1YLR039C ECM27P47144 725 aa2.04□□□□□ -2.08
RIC1YLR039C HEL2Q05580 639 aaKnown RBP2.04□□□□□ -2.08
RIC1YLR039C PHO92Q06390 306 aa2.04□□□□□ -2.08
RIC1YLR039C SSK1Q07084 712 aa2.04□□□□□ -2.08
RIC1YLR039C BUD3P25558 1636 aa2.04□□□□□ -2.08
RIC1YLR039C IRC20Q06554 1556 aa2.04□□□□□ -2.08
RIC1YLR039C REC107P21651 314 aa2.03□□□□□ -2.08
RIC1YLR039C GID7P25569 745 aa2.03□□□□□ -2.08
RIC1YLR039C SLM4P38247 162 aa2.03□□□□□ -2.08
RIC1YLR039C RXT2P38255 430 aa2.03□□□□□ -2.08
RIC1YLR039C ERG7P38604 731 aa2.03□□□□□ -2.08
RIC1YLR039C OCA1P50946 238 aaPredicted RBP2.03□□□□□ -2.08
RIC1YLR039C MDM30Q05930 598 aa2.03□□□□□ -2.08
RIC1YLR039C SPE3Q12074 293 aaKnown RBP2.03□□□□□ -2.08
RIC1YLR039C TAD3Q9URQ3 322 aa2.03□□□□□ -2.08
RIC1YLR039C POL1P13382 1468 aa2.03□□□□□ -2.08
RIC1YLR039C YFL068WP0CX99 160 aa2.03□□□□□ -2.08
RIC1YLR039C YLL066W-AP0CY00 160 aa2.03□□□□□ -2.08
RIC1YLR039C YLL067W-AP0CY01 160 aa2.03□□□□□ -2.08
RIC1YLR039C SEC63P14906 663 aa2.03□□□□□ -2.08
RIC1YLR039C TYR1P20049 452 aa2.03□□□□□ -2.08
RIC1YLR039C RAD14P28519 371 aa2.03□□□□□ -2.08
RIC1YLR039C SPC34P36131 295 aa2.03□□□□□ -2.08
RIC1YLR039C EFM2P38347 419 aa2.03□□□□□ -2.08
RIC1YLR039C STP1Q00947 519 aa2.03□□□□□ -2.08
RIC1YLR039C CIK1Q01649 594 aa2.03□□□□□ -2.08
RIC1YLR039C ACL4Q03771 387 aa2.03□□□□□ -2.08
RIC1YLR039C DON1Q05610 365 aa2.03□□□□□ -2.08
RIC1YLR039C RPO21P04050 1733 aaKnown RBP2.03□□□□□ -2.08
RIC1YLR039C SUI2P20459 304 aaKnown RBP2.02□□□□□ -2.09
RIC1YLR039C SNC1P31109 117 aa2.02□□□□□ -2.09
RIC1YLR039C YPK3P38070 525 aa2.02□□□□□ -2.09
RIC1YLR039C JEM1P40358 645 aa2.02□□□□□ -2.09
RIC1YLR039C SCD6P45978 349 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
RIC1YLR039C OGG1P53397 376 aaPredicted RBP2.02□□□□□ -2.09
RIC1YLR039C BET4Q00618 327 aa2.02□□□□□ -2.09
RIC1YLR039C DIG1Q03063 452 aaKnown RBP2.02□□□□□ -2.09
RIC1YLR039C SLD5Q03406 294 aa2.02□□□□□ -2.09
RIC1YLR039C RBA50Q04418 439 aa2.02□□□□□ -2.09
RIC1YLR039C YMR034CQ05131 434 aaPredicted RBP2.02□□□□□ -2.09
RIC1YLR039C UAF30Q08747 228 aa2.02□□□□□ -2.09
RIC1YLR039C CFT2Q12102 859 aaPredicted RBP2.02□□□□□ -2.09
RIC1YLR039C CTF3Q12748 733 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms