RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C CIN4P39110 191 aa1.77□□□□□ -2.13
RPL40BYKR094C SAP185P40856 1058 aa1.77□□□□□ -2.13
RPL40BYKR094C NCA3P46955 337 aa1.77□□□□□ -2.13
RPL40BYKR094C AAD10P47182 288 aa1.77□□□□□ -2.13
RPL40BYKR094C RPC11Q04307 110 aaPredicted RBP1.77□□□□□ -2.13
RPL40BYKR094C YMR018WQ04364 514 aa1.77□□□□□ -2.13
RPL40BYKR094C SSM4P40318 1319 aa1.76□□□□□ -2.13
RPL40BYKR094C GLK1P17709 500 aaKnown RBP1.76□□□□□ -2.13
RPL40BYKR094C SSH4P32343 579 aa1.76□□□□□ -2.13
RPL40BYKR094C DUG2P38149 878 aa1.76□□□□□ -2.13
RPL40BYKR094C TIF4631P39935 952 aaKnown RBP1.76□□□□□ -2.13
RPL40BYKR094C OST1P41543 476 aaKnown RBP1.76□□□□□ -2.13
RPL40BYKR094C POP6P53218 158 aa1.76□□□□□ -2.13
RPL40BYKR094C YDL121CQ07541 149 aa1.76□□□□□ -2.13
RPL40BYKR094C FDH1Q08911 376 aa1.76□□□□□ -2.13
RPL40BYKR094C KEL3Q08979 651 aaPredicted RBP1.76□□□□□ -2.13
RPL40BYKR094C SNF1P06782 633 aaKnown RBP1.75□□□□□ -2.13
RPL40BYKR094C DBF20P32328 564 aa1.75□□□□□ -2.13
RPL40BYKR094C SWE1P32944 819 aa1.75□□□□□ -2.13
RPL40BYKR094C XRS2P33301 854 aa1.75□□□□□ -2.13
RPL40BYKR094C RSM22P36056 628 aa1.75□□□□□ -2.13
RPL40BYKR094C STB6P36085 766 aa1.75□□□□□ -2.13
RPL40BYKR094C MRPL10P36520 322 aa1.75□□□□□ -2.13
RPL40BYKR094C MIX23P38162 196 aa1.75□□□□□ -2.13
RPL40BYKR094C VID24P38263 362 aa1.75□□□□□ -2.13
RPL40BYKR094C THP1Q08231 455 aa1.75□□□□□ -2.13
RPL40BYKR094C IES4Q08561 116 aa1.75□□□□□ -2.13
RPL40BYKR094C YPS3Q12303 508 aa1.75□□□□□ -2.13
RPL40BYKR094C MES1P00958 751 aaKnown RBP1.74□□□□□ -2.13
RPL40BYKR094C ARD1P07347 238 aaPredicted RBP1.74□□□□□ -2.13
RPL40BYKR094C GFD2P25370 566 aaKnown RBP1.74□□□□□ -2.13
RPL40BYKR094C BUB3P26449 341 aa1.74□□□□□ -2.13
RPL40BYKR094C SEF1P34228 1148 aa1.74□□□□□ -2.13
RPL40BYKR094C BNA4P38169 460 aa1.74□□□□□ -2.13
RPL40BYKR094C TCM62P38228 572 aaKnown RBP1.74□□□□□ -2.13
RPL40BYKR094C YHR131CP38835 850 aa1.74□□□□□ -2.13
RPL40BYKR094C VID22Q05934 901 aa1.74□□□□□ -2.13
RPL40BYKR094C TCO89Q08921 799 aa1.74□□□□□ -2.13
RPL40BYKR094C YPL199CQ08954 240 aa1.74□□□□□ -2.13
RPL40BYKR094C CRM1P30822 1084 aaKnown RBP1.73□□□□□ -2.13
RPL40BYKR094C YBR144CP34215 104 aa1.73□□□□□ -2.13
RPL40BYKR094C SHP1P34223 423 aa1.73□□□□□ -2.13
RPL40BYKR094C KKQ8P36004 724 aa1.73□□□□□ -2.13
RPL40BYKR094C PSY4P38193 441 aa1.73□□□□□ -2.13
RPL40BYKR094C ERP2P39704 215 aa1.73□□□□□ -2.13
RPL40BYKR094C IES5P40060 125 aa1.73□□□□□ -2.13
RPL40BYKR094C KAP123P40069 1113 aaKnown RBP1.73□□□□□ -2.13
RPL40BYKR094C VID27P40157 782 aa1.73□□□□□ -2.13
RPL40BYKR094C BRO1P48582 844 aa1.73□□□□□ -2.13
RPL40BYKR094C YML131WQ03102 365 aa1.73□□□□□ -2.13
RPL40BYKR094C HER2Q03557 464 aa1.73□□□□□ -2.13
RPL40BYKR094C MF(ALPHA)1P01149 165 aa1.72□□□□□ -2.13
RPL40BYKR094C SAM1P10659 382 aaKnown RBP1.72□□□□□ -2.13
RPL40BYKR094C SAM2P19358 384 aaKnown RBP1.72□□□□□ -2.13
RPL40BYKR094C CHS3P29465 1165 aa1.72□□□□□ -2.13
RPL40BYKR094C RPN12P32496 274 aa1.72□□□□□ -2.13
RPL40BYKR094C MNS1P32906 549 aa1.72□□□□□ -2.13
RPL40BYKR094C SLC1P33333 303 aa1.72□□□□□ -2.13
RPL40BYKR094C UBP11P36026 717 aa1.72□□□□□ -2.13
RPL40BYKR094C MAL33P38157 468 aa1.72□□□□□ -2.13
RPL40BYKR094C GTR1Q00582 310 aa1.72□□□□□ -2.13
RPL40BYKR094C SNO4Q04902 237 aa1.72□□□□□ -2.13
RPL40BYKR094C COQ9Q05779 260 aa1.72□□□□□ -2.13
RPL40BYKR094C HSP33Q08914 237 aaKnown RBP1.72□□□□□ -2.13
RPL40BYKR094C YPL272CQ08984 517 aa1.72□□□□□ -2.13
RPL40BYKR094C HSP32Q08992 237 aa1.72□□□□□ -2.13
RPL40BYKR094C RFM1Q12192 310 aa1.72□□□□□ -2.13
RPL40BYKR094C PRB1P09232 635 aa1.71□□□□□ -2.14
RPL40BYKR094C NUP2P32499 720 aa1.71□□□□□ -2.14
RPL40BYKR094C SSE2P32590 693 aaKnown RBP1.71□□□□□ -2.14
RPL40BYKR094C MFT1P33441 392 aaKnown RBP1.71□□□□□ -2.14
RPL40BYKR094C JNM1P36224 373 aa1.71□□□□□ -2.14
RPL40BYKR094C YJR085CP47131 105 aaKnown RBP1.71□□□□□ -2.14
RPL40BYKR094C COG4Q06096 861 aa1.71□□□□□ -2.14
RPL40BYKR094C OPY2Q06810 360 aa1.71□□□□□ -2.14
RPL40BYKR094C LUC7Q07508 261 aaPredicted RBP1.71□□□□□ -2.14
RPL40BYKR094C SSP2Q08646 371 aa1.71□□□□□ -2.14
RPL40BYKR094C ENT1Q12518 454 aa1.71□□□□□ -2.14
RPL40BYKR094C YOL087CQ99247 1116 aa1.71□□□□□ -2.14
RPL40BYKR094C INH1P01097 85 aa1.7□□□□□ -2.14
RPL40BYKR094C NFT1P0CE68 1218 aa1.7□□□□□ -2.14
RPL40BYKR094C SGS1P35187 1447 aa1.7□□□□□ -2.14
RPL40BYKR094C RRN3P36070 627 aa1.7□□□□□ -2.14
RPL40BYKR094C NOC2P39744 710 aaKnown RBP1.7□□□□□ -2.14
RPL40BYKR094C GAB1P41733 394 aa1.7□□□□□ -2.14
RPL40BYKR094C ALK1P43633 760 aaKnown RBP1.7□□□□□ -2.14
RPL40BYKR094C ZPR1P53303 486 aaKnown RBP1.7□□□□□ -2.14
RPL40BYKR094C OGG1P53397 376 aaPredicted RBP1.7□□□□□ -2.14
RPL40BYKR094C YPR091CQ06833 770 aa1.7□□□□□ -2.14
RPL40BYKR094C CUE5Q08412 411 aaKnown RBP1.7□□□□□ -2.14
RPL40BYKR094C PRE8P23639 250 aa1.69□□□□□ -2.14
RPL40BYKR094C SPS22P25380 463 aa1.69□□□□□ -2.14
RPL40BYKR094C MCM10P32354 571 aa1.69□□□□□ -2.14
RPL40BYKR094C AIM22P47051 409 aa1.69□□□□□ -2.14
RPL40BYKR094C MTM1P53320 366 aa1.69□□□□□ -2.14
RPL40BYKR094C CBK1P53894 756 aa1.69□□□□□ -2.14
RPL40BYKR094C YKU80Q04437 629 aa1.69□□□□□ -2.14
RPL40BYKR094C TSR2Q06672 205 aaKnown RBP1.69□□□□□ -2.14
RPL40BYKR094C NBP2Q12163 236 aa1.69□□□□□ -2.14
RPL40BYKR094C PRM7Q12459 698 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms