RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABF1	YKL112W	AME1	P38313	324 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	YMR134W	P40207	237 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	PRM2	P40534	656 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	TDA10	P42938	290 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	IRC7	P43623	340 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	NPA3	P47122	385 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	CCC1	P47818	322 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	NSA1	P53136	463 aa	Predicted RBP	4.58	□□□□□ -1.68
ABF1	YKL112W	MAL12	P53341	584 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	EEB1	Q02891	456 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	MMT1	Q03218	510 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	YMR010W	Q03687	405 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	CDD1	Q06549	142 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	FMP45	Q07651	309 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	YLL007C	Q07799	665 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	RSA1	Q08932	381 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	RPN6	Q12377	434 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	ISN1	Q99312	450 aa		4.58	□□□□□ -1.68
ABF1	YKL112W	KIN28	P06242	306 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	FUM1	P08417	488 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	FRS1	P15624	595 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
ABF1	YKL112W	HOP1	P20050	605 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	MYO3	P36006	1272 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	SRP102	P36057	244 aa	Predicted RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	YKL070W	P36087	169 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	ALY1	P36117	915 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	FIG1	P38224	298 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	MNN9	P39107	395 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	SEC72	P39742	193 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	HXT14	P42833	540 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	ALR2	P43553	858 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	CAF16	P43569	289 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	IRC8	P47046	822 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	MSE1	P48525	536 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	MND1	P53102	219 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	PNC1	P53184	216 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	SHY1	P53266	389 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	CPR6	P53691	371 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	TEP1	P53916	434 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	MRP51	Q02950	344 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	PEX12	Q04370	399 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	LUC7	Q07508	261 aa	Predicted RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	RFU1	Q08003	200 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	PEX15	Q08215	383 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	MED2	Q12124	431 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	YDR262W	Q12331	272 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	KCS1	Q12494	1050 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	IRA1	P18963	3092 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	PRC1	P00729	532 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	GCR1	P07261	785 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	ABF1	P14164	731 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	CBF1	P17106	351 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	DBP5	P20449	482 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	SLY41	P22215	453 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	VPS34	P22543	875 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	CPR4	P25334	318 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	ADE1	P27616	306 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	SIP1	P32578	815 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	GCG1	P32656	232 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	KAP122	P32767	1081 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	SUI1	P32911	108 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	YOX1	P34161	385 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	NEM1	P38757	446 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	PSD1	P39006	500 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	YER010C	P40011	234 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	SNL1	P40548	159 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	AGP3	P43548	558 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
ABF1	YKL112W	ACS1	Q01574	713 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	SKI8	Q02793	397 aa	Predicted RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	RNY1	Q02933	434 aa	Known RBP	4.57	□□□□□ -1.68
ABF1	YKL112W	PRM15	Q03262	622 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	RUB1	Q03919	77 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	HED1	Q03937	162 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	CDA2	Q06703	312 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	YPL272C	Q08984	517 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	YDL176W	Q12027	708 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	RRD2	Q12461	358 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	SEY1	Q99287	776 aa		4.57	□□□□□ -1.68
ABF1	YKL112W	LEU4	P06208	619 aa	Known RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	GPH1	P06738	902 aa	Known RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	ARD1	P07347	238 aa	Predicted RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	MF(ALPHA)2	P32435	120 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	LIP5	P32875	414 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	MKS1	P34072	584 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	YKL097C	P34245	136 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	PPS1	P38148	807 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	AMN1	P38285	549 aa	Predicted RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	MCX1	P38323	520 aa	Predicted RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
ABF1	YKL112W	RPH1	P39956	796 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	YEL025C	P39991	1188 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	YAT2	P40017	923 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	RPS7B	P48164	190 aa	Known RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	DRN1	P53255	507 aa	Known RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	CUS2	P53830	285 aa	Predicted RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	YKR005C	Q02203	525 aa		4.56	□□□□□ -1.68
ABF1	YKL112W	EFR3	Q03653	782 aa	Known RBP	4.56	□□□□□ -1.68
ABF1	YKL112W	YDR239C	Q03780	787 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms