RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C ECM27P47144 725 aa2.09□□□□□ -2.07
NUP120YKL057C TRM112P53738 135 aaPredicted RBP2.09□□□□□ -2.07
NUP120YKL057C ADA2Q02336 434 aa2.09□□□□□ -2.07
NUP120YKL057C KAP120Q02932 1032 aa2.09□□□□□ -2.07
NUP120YKL057C ERP4Q12450 207 aa2.09□□□□□ -2.07
NUP120YKL057C SET6Q12529 373 aa2.09□□□□□ -2.07
NUP120YKL057C TIF5P38431 405 aaKnown RBP2.09□□□□□ -2.08
NUP120YKL057C SNM1P40993 198 aa2.09□□□□□ -2.08
NUP120YKL057C HIT1P46973 164 aa2.09□□□□□ -2.08
NUP120YKL057C BNA3P47039 444 aaKnown RBP2.09□□□□□ -2.08
NUP120YKL057C CIK1Q01649 594 aa2.09□□□□□ -2.08
NUP120YKL057C VTC3Q02725 835 aa2.09□□□□□ -2.08
NUP120YKL057C PHO92Q06390 306 aa2.09□□□□□ -2.08
NUP120YKL057C DST1P07273 309 aa2.08□□□□□ -2.08
NUP120YKL057C CHO1P08456 276 aa2.08□□□□□ -2.08
NUP120YKL057C NOP1P15646 327 aaKnown RBP2.08□□□□□ -2.08
NUP120YKL057C SPB1P25582 841 aaPredicted RBP2.08□□□□□ -2.08
NUP120YKL057C YTA12P40341 825 aa2.08□□□□□ -2.08
NUP120YKL057C MKT1P40850 830 aaKnown RBP2.08□□□□□ -2.08
NUP120YKL057C PIL1P53252 339 aaKnown RBP2.08□□□□□ -2.08
NUP120YKL057C YDR387CQ04162 555 aa2.08□□□□□ -2.08
NUP120YKL057C SEC39Q12745 709 aa2.08□□□□□ -2.08
NUP120YKL057C YCR051WP25631 222 aa2.08□□□□□ -2.08
NUP120YKL057C BEM1P29366 551 aa2.08□□□□□ -2.08
NUP120YKL057C FRE2P36033 711 aa2.08□□□□□ -2.08
NUP120YKL057C VPS52P39904 641 aa2.08□□□□□ -2.08
NUP120YKL057C YIL029CP40538 142 aa2.08□□□□□ -2.08
NUP120YKL057C YIR014WP40570 242 aa2.08□□□□□ -2.08
NUP120YKL057C CIA1Q05583 330 aa2.08□□□□□ -2.08
NUP120YKL057C PDH1Q12428 516 aaKnown RBP2.08□□□□□ -2.08
NUP120YKL057C BUD5P25300 642 aaPredicted RBP2.08□□□□□ -2.08
NUP120YKL057C SNU114P36048 1008 aaKnown RBP2.08□□□□□ -2.08
NUP120YKL057C SNL1P40548 159 aa2.08□□□□□ -2.08
NUP120YKL057C BNA1P47096 177 aa2.08□□□□□ -2.08
NUP120YKL057C JJJ1P53863 590 aa2.08□□□□□ -2.08
NUP120YKL057C GDH1P07262 454 aaKnown RBP2.07□□□□□ -2.08
NUP120YKL057C RPC53P25441 422 aa2.07□□□□□ -2.08
NUP120YKL057C FUN19P28003 413 aaPredicted RBP2.07□□□□□ -2.08
NUP120YKL057C NDC1P32500 655 aa2.07□□□□□ -2.08
NUP120YKL057C YBL028CP38202 106 aa2.07□□□□□ -2.08
NUP120YKL057C DLD2P46681 530 aaKnown RBP2.07□□□□□ -2.08
NUP120YKL057C LYS20P48570 428 aaKnown RBP2.07□□□□□ -2.08
NUP120YKL057C LYS4P49367 693 aaPredicted RBP2.07□□□□□ -2.08
NUP120YKL057C PIG1Q06216 648 aa2.07□□□□□ -2.08
NUP120YKL057C PPT2Q12036 173 aa2.07□□□□□ -2.08
NUP120YKL057C AEP3Q12089 606 aa2.07□□□□□ -2.08
NUP120YKL057C NDI1P32340 513 aa2.07□□□□□ -2.08
NUP120YKL057C SOR1P35497 357 aaKnown RBP2.07□□□□□ -2.08
NUP120YKL057C MRPL10P36520 322 aa2.07□□□□□ -2.08
NUP120YKL057C DHH1P39517 506 aaKnown RBP2.07□□□□□ -2.08
NUP120YKL057C YJL213WP40896 331 aa2.07□□□□□ -2.08
NUP120YKL057C SCD6P45978 349 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08 RIP-Chip
NUP120YKL057C LIP2Q06005 328 aa2.07□□□□□ -2.08
NUP120YKL057C PKH2Q12236 1081 aaKnown RBP2.07□□□□□ -2.08
NUP120YKL057C HIS4P00815 799 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C BAR1P12630 587 aa2.06□□□□□ -2.08
NUP120YKL057C PUP3P25451 205 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C YCR100CP25606 316 aa2.06□□□□□ -2.08
NUP120YKL057C RIM1P32445 135 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C MUD1P32605 298 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C ECM15P35195 104 aa2.06□□□□□ -2.08
NUP120YKL057C DOA1P36037 715 aa2.06□□□□□ -2.08
NUP120YKL057C RIB5P38145 238 aa2.06□□□□□ -2.08
NUP120YKL057C MAM33P40513 266 aa2.06□□□□□ -2.08
NUP120YKL057C SSN8P47821 323 aa2.06□□□□□ -2.08
NUP120YKL057C YGR111WP53265 400 aa2.06□□□□□ -2.08
NUP120YKL057C HHF1P02309 103 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C MDH1P17505 334 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
NUP120YKL057C PTH1P38876 190 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C PHM8P40025 321 aa2.06□□□□□ -2.08
NUP120YKL057C STB2P46679 850 aa2.06□□□□□ -2.08
NUP120YKL057C SAM50P53969 484 aa2.06□□□□□ -2.08
NUP120YKL057C YPL068CQ02749 293 aa2.06□□□□□ -2.08
NUP120YKL057C PEX25Q02969 394 aa2.06□□□□□ -2.08
NUP120YKL057C SNX3Q08826 162 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C ARG4P04076 463 aaPredicted RBP2.06□□□□□ -2.08
NUP120YKL057C PPZ1P26570 692 aa2.06□□□□□ -2.08
NUP120YKL057C NIP100P33420 868 aa2.06□□□□□ -2.08
NUP120YKL057C NUP133P36161 1157 aa2.06□□□□□ -2.08
NUP120YKL057C TPA1P40032 644 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C YHC3P47040 408 aa2.06□□□□□ -2.08
NUP120YKL057C CWC22P53333 577 aaKnown RBP2.06□□□□□ -2.08
NUP120YKL057C ASI1P54074 624 aa2.06□□□□□ -2.08
NUP120YKL057C HOT1Q03213 719 aa2.06□□□□□ -2.08
NUP120YKL057C MLH2Q07980 695 aa2.06□□□□□ -2.08
NUP120YKL057C YOR387CQ08910 206 aa2.06□□□□□ -2.08
NUP120YKL057C KEL3Q08979 651 aaPredicted RBP2.06□□□□□ -2.08
NUP120YKL057C MED2Q12124 431 aa2.06□□□□□ -2.08
NUP120YKL057C YDL007C-AQ2V2Q0 85 aa2.06□□□□□ -2.08
NUP120YKL057C TY1B-AO13527 1196 aaKnown RBP2.05□□□□□ -2.08
NUP120YKL057C SLY1P22213 666 aa2.05□□□□□ -2.08
NUP120YKL057C CLB1P24868 471 aa2.05□□□□□ -2.08
NUP120YKL057C YCR043CP25361 127 aa2.05□□□□□ -2.08
NUP120YKL057C MDM31P38880 579 aa2.05□□□□□ -2.08
NUP120YKL057C MBB1P39534 108 aa2.05□□□□□ -2.08
NUP120YKL057C HOS2P53096 452 aaPredicted RBP2.05□□□□□ -2.08
NUP120YKL057C CAF40P53829 373 aa2.05□□□□□ -2.08
NUP120YKL057C YDR131CQ03899 556 aa2.05□□□□□ -2.08
NUP120YKL057C ERB1Q04660 807 aaKnown RBP2.05□□□□□ -2.08
NUP120YKL057C YMR254CQ04838 102 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms