RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W RRP3P38712 501 aaKnown RBP4.24□□□□□ -1.73
PTM1YKL039W CCT4P39078 528 aaKnown RBP4.24□□□□□ -1.73
PTM1YKL039W CIN4P39110 191 aa4.24□□□□□ -1.73
PTM1YKL039W DRN1P53255 507 aaKnown RBP4.24□□□□□ -1.73
PTM1YKL039W BUD32P53323 261 aa4.24□□□□□ -1.73
PTM1YKL039W YEH2Q07950 538 aa4.24□□□□□ -1.73
PTM1YKL039W TIP41Q12199 356 aa4.24□□□□□ -1.73
PTM1YKL039W SEC53P07283 254 aaKnown RBP4.23□□□□□ -1.73
PTM1YKL039W OLE1P21147 510 aaKnown RBP4.23□□□□□ -1.73
PTM1YKL039W YKL023WP36103 277 aaKnown RBP4.23□□□□□ -1.73
PTM1YKL039W YTA12P40341 825 aa4.23□□□□□ -1.73
PTM1YKL039W YGR126WP53274 230 aa4.23□□□□□ -1.73
PTM1YKL039W RPC11Q04307 110 aaPredicted RBP4.23□□□□□ -1.73
PTM1YKL039W HCR1Q05775 265 aaKnown RBP4.23□□□□□ -1.73
PTM1YKL039W YDL121CQ07541 149 aa4.23□□□□□ -1.73
PTM1YKL039W SDH5Q08230 162 aa4.23□□□□□ -1.73
PTM1YKL039W YML133CQ03099 1374 aa4.23□□□□□ -1.73
PTM1YKL039W YLL067CQ07888 1374 aa4.23□□□□□ -1.73
PTM1YKL039W PEP5P12868 1029 aa4.23□□□□□ -1.73
PTM1YKL039W VPS17P32913 551 aa4.23□□□□□ -1.73
PTM1YKL039W DHH1P39517 506 aaKnown RBP4.23□□□□□ -1.73
PTM1YKL039W MRX6P48564 524 aa4.23□□□□□ -1.73
PTM1YKL039W RPM2Q02773 1202 aa4.23□□□□□ -1.73
PTM1YKL039W SHR3Q02774 210 aa4.23□□□□□ -1.73
PTM1YKL039W RTT103Q05543 409 aa4.23□□□□□ -1.73
PTM1YKL039W YOR365CQ08844 703 aa4.23□□□□□ -1.73
PTM1YKL039W EST1P17214 699 aaPredicted RBP4.22□□□□□ -1.73
PTM1YKL039W ART10P18634 518 aaKnown RBP4.22□□□□□ -1.73
PTM1YKL039W GFD2P25370 566 aaKnown RBP4.22□□□□□ -1.73
PTM1YKL039W RGT1P32862 1170 aa4.22□□□□□ -1.73
PTM1YKL039W PFF1P38244 976 aa4.22□□□□□ -1.73
PTM1YKL039W YHR210CP38893 341 aa4.22□□□□□ -1.73
PTM1YKL039W TMA108P40462 946 aa4.22□□□□□ -1.73
PTM1YKL039W IKS1P47042 667 aa4.22□□□□□ -1.73
PTM1YKL039W VID30P53076 958 aa4.22□□□□□ -1.73
PTM1YKL039W COQ9Q05779 260 aa4.22□□□□□ -1.73
PTM1YKL039W CTI6Q08923 506 aa4.22□□□□□ -1.73
PTM1YKL039W PEP4P07267 405 aaKnown RBP4.21□□□□□ -1.74
PTM1YKL039W SUI2P20459 304 aaKnown RBP4.21□□□□□ -1.74
PTM1YKL039W SEC62P21825 274 aa4.21□□□□□ -1.74
PTM1YKL039W ELO2P25358 347 aa4.21□□□□□ -1.74
PTM1YKL039W SEF1P34228 1148 aa4.21□□□□□ -1.74
PTM1YKL039W NOP4P37838 685 aaKnown RBP4.21□□□□□ -1.74
PTM1YKL039W SGN1P40561 250 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
PTM1YKL039W YJR154WP47181 346 aa4.21□□□□□ -1.74
PTM1YKL039W IMD4P50094 524 aaKnown RBP4.21□□□□□ -1.74
PTM1YKL039W ALT2P52892 507 aa4.21□□□□□ -1.74
PTM1YKL039W YGL082WP53155 381 aa4.21□□□□□ -1.74
PTM1YKL039W IPI3P53877 555 aa4.21□□□□□ -1.74
PTM1YKL039W YDL057WQ07379 328 aa4.21□□□□□ -1.74
PTM1YKL039W CDC45Q08032 650 aa4.21□□□□□ -1.74
PTM1YKL039W RCN2Q12044 265 aa4.21□□□□□ -1.74
PTM1YKL039W YJR112W-AQ3E743 109 aa4.21□□□□□ -1.74
PTM1YKL039W YLR278CQ05854 1341 aa4.21□□□□□ -1.74
PTM1YKL039W AMD1P15274 810 aaKnown RBP4.2□□□□□ -1.74
PTM1YKL039W OSM1P21375 501 aaKnown RBP4.2□□□□□ -1.74
PTM1YKL039W LOS1P33418 1100 aaPredicted RBP4.2□□□□□ -1.74
PTM1YKL039W SIP2P34164 415 aaKnown RBP4.2□□□□□ -1.74
PTM1YKL039W VPS52P39904 641 aa4.2□□□□□ -1.74
PTM1YKL039W ALG5P40350 334 aa4.2□□□□□ -1.74
PTM1YKL039W CSM2P40465 213 aa4.2□□□□□ -1.74
PTM1YKL039W GLO2Q05584 274 aa4.2□□□□□ -1.74
PTM1YKL039W YBR298C-AQ8TGK4 73 aa4.2□□□□□ -1.74
PTM1YKL039W RAD52P06778 471 aaKnown RBP4.19□□□□□ -1.74
PTM1YKL039W APE1P14904 514 aa4.19□□□□□ -1.74
PTM1YKL039W EBP2P36049 427 aaKnown RBP4.19□□□□□ -1.74
PTM1YKL039W SHC1P39000 512 aa4.19□□□□□ -1.74
PTM1YKL039W AIM22P47051 409 aa4.19□□□□□ -1.74
PTM1YKL039W VPS75P53853 264 aa4.19□□□□□ -1.74
PTM1YKL039W RLM1Q12224 676 aa4.19□□□□□ -1.74
PTM1YKL039W FIG2P25653 1609 aa4.19□□□□□ -1.74
PTM1YKL039W UTP10P42945 1769 aaKnown RBP4.19□□□□□ -1.74
PTM1YKL039W RPL15AP05748 204 aaKnown RBP4.19□□□□□ -1.74
PTM1YKL039W CBS1P14066 229 aa4.19□□□□□ -1.74
PTM1YKL039W MET8P15807 274 aa4.19□□□□□ -1.74
PTM1YKL039W IMP2'P32351 346 aa4.19□□□□□ -1.74
PTM1YKL039W TCD2P36101 447 aaKnown RBP4.19□□□□□ -1.74
PTM1YKL039W OSH3P38713 996 aaKnown RBP4.19□□□□□ -1.74
PTM1YKL039W HSH49Q99181 213 aaPredicted RBP4.19□□□□□ -1.74
PTM1YKL039W SMY1P32364 656 aaKnown RBP4.18□□□□□ -1.74
PTM1YKL039W REG2P38232 338 aa4.18□□□□□ -1.74
PTM1YKL039W SCD6P45978 349 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
PTM1YKL039W ERO1Q03103 563 aa4.18□□□□□ -1.74
PTM1YKL039W BNA5Q05979 453 aa4.18□□□□□ -1.74
PTM1YKL039W SUC2P00724 532 aa4.17□□□□□ -1.74
PTM1YKL039W PRD1P25375 712 aa4.17□□□□□ -1.74
PTM1YKL039W ATS1P31386 333 aa4.17□□□□□ -1.74
PTM1YKL039W NDC1P32500 655 aa4.17□□□□□ -1.74
PTM1YKL039W PRS1P32895 427 aaKnown RBP4.17□□□□□ -1.74
PTM1YKL039W YNK1P36010 153 aaKnown RBP4.17□□□□□ -1.74
PTM1YKL039W SRO77P38163 1010 aa4.17□□□□□ -1.74
PTM1YKL039W MDM31P38880 579 aa4.17□□□□□ -1.74
PTM1YKL039W RTT101P47050 842 aa4.17□□□□□ -1.74
PTM1YKL039W YGR066CP53242 292 aa4.17□□□□□ -1.74
PTM1YKL039W ARE2P53629 642 aaKnown RBP4.17□□□□□ -1.74
PTM1YKL039W TOP1P04786 769 aa4.16□□□□□ -1.74
PTM1YKL039W PRP16P15938 1071 aaPredicted RBP4.16□□□□□ -1.74
PTM1YKL039W YCR007CP25354 239 aa4.16□□□□□ -1.74
PTM1YKL039W PRO3P32263 286 aaKnown RBP4.16□□□□□ -1.74
PTM1YKL039W FRE1P32791 686 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms