RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	YGR127W	P53275	312 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	CPR6	P53691	371 aa	Known RBP	4.77	□□□□□ -1.65
CPS1	YJL172W	YNR061C	P53747	219 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	VAC7	P53950	1165 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	OSH6	Q02201	448 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	TOF2	Q02208	771 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	NOG1	Q02892	647 aa	Known RBP	4.77	□□□□□ -1.65
CPS1	YJL172W	MZM1	Q03429	123 aa	Predicted RBP	4.77	□□□□□ -1.65
CPS1	YJL172W	YDR239C	Q03780	787 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	SNU56	Q03782	492 aa	Known RBP	4.77	□□□□□ -1.65
CPS1	YJL172W	DFG5	Q05031	458 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	DCR2	Q05924	578 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	MRL1	Q06815	381 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	PNS1	Q12412	539 aa		4.77	□□□□□ -1.65
CPS1	YJL172W	RPL6B	P05739	176 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	HIP1	P06775	603 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	GLN4	P13188	809 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	DAL81	P21657	970 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	DBP2	P24783	546 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	LRE1	P25579	583 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	VBA3	P25594	458 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	RPS5	P26783	225 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	ACH1	P32316	526 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	UTR2	P32623	467 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	DHR2	P36009	735 aa	Predicted RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	ELF1	P36053	145 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	VBA5	P36172	582 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	IMD2	P38697	523 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	APM2	P38700	605 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	SUR2	P38992	349 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	PCL6	P40038	420 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	IMA5	P40884	581 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	ERG10	P41338	398 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	DIM1	P41819	318 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	RSM26	P47141	266 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	PRP24	P49960	444 aa	Known RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	MET13	P53128	600 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	LCL3	P53153	274 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	YGL036W	P53185	909 aa	Predicted RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	SLX9	P53251	210 aa	Predicted RBP	4.76	□□□□□ -1.65
CPS1	YJL172W	SPC98	P53540	846 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	ORC3	P54790	616 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	RUB1	Q03919	77 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	TRE2	Q08693	809 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	MDM12	Q92328	271 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	YPT6	Q99260	215 aa		4.76	□□□□□ -1.65
CPS1	YJL172W	MOT1	P32333	1867 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	RPL25	P04456	142 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	RPP1A	P05318	106 aa	Predicted RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	ATP1	P07251	545 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	TUB1	P09733	447 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	ATR1	P13090	542 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	DAT1	P13483	248 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	AMD2	P22580	549 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	VAM7	P32912	316 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	HMT1	P38074	348 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	AGP2	P38090	596 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	RFS1	P38234	210 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	YBR197C	P38306	217 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	YBR238C	P38330	731 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	DSE1	P40077	573 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	ALG8	P40351	577 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	PAC11	P40960	533 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	NMD5	P46970	1048 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	PSP1	P50896	841 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	TAF6	P53040	516 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	YGL108C	P53139	140 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	DAM1	P53267	343 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	SNF12	P53628	566 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	ELP3	Q02908	557 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	URC2	Q04411	772 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	SWF1	Q04629	336 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	MRI1	Q06489	411 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	OPI10	Q08202	246 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	TRE1	Q08919	783 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	TGS1	Q12052	315 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	WTM2	Q12206	467 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	RBD2	Q12270	262 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	PRC1	P00729	532 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	RAS1	P01119	309 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	GCN4	P03069	281 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	CAN1	P04817	590 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	LEU4	P06208	619 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	FUR1	P18562	216 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	GRR1	P24814	1151 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	DBF4	P32325	704 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	LOT5	P34234	306 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	MAE1	P36013	669 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	MCM7	P38132	845 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	SLM4	P38247	162 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	HIS2	P38635	335 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	YHR182W	P38870	785 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	YDR089W	P38966	869 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	DPH1	P40487	425 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	CCT8	P47079	568 aa	Known RBP	4.75	□□□□□ -1.65
CPS1	YJL172W	BIR1	P47134	954 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	VPS25	P47142	202 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	USE1	P53146	245 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	TWF1	P53250	332 aa		4.75	□□□□□ -1.65
CPS1	YJL172W	YNR068C	P53754	272 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms