RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BBC1	YJL020C	RSB1	Q08417	382 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	BUD7	Q08754	746 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	YDL109C	Q12103	647 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
BBC1	YJL020C	YOL107W	Q12239	342 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	CDC37	P06101	506 aa	Known RBP	4.37	□□□□□ -1.71
BBC1	YJL020C	SAM1	P10659	382 aa	Known RBP	4.37	□□□□□ -1.71
BBC1	YJL020C	MCM4	P30665	933 aa	Known RBP	4.37	□□□□□ -1.71
BBC1	YJL020C	RML2	P32611	393 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	YKR078W	P36158	585 aa	Known RBP	4.37	□□□□□ -1.71
BBC1	YJL020C	YBL029W	P38201	376 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	SHU2	P38957	223 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	RIB4	P50861	169 aa	Predicted RBP	4.37	□□□□□ -1.71
BBC1	YJL020C	NSG2	P53898	299 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	RIM13	Q03792	727 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	HCR1	Q05775	265 aa	Known RBP	4.37	□□□□□ -1.71
BBC1	YJL020C	GEP3	Q08622	556 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	LDB19	Q12502	818 aa		4.37	□□□□□ -1.71
BBC1	YJL020C	URA3	P03962	267 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	SAG1	P20840	650 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	PRO3	P32263	286 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	HXT3	P32466	567 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	SPO23	P33757	523 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	PMT1	P33775	817 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	ALY1	P36117	915 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	SSN3	P39073	555 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	JHD1	P40034	492 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	DBP6	P53734	629 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	CUS1	Q02554	436 aa	Predicted RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	DCS1	Q06151	350 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	GAS5	Q08193	484 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	POL30	P15873	258 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	CDC23	P16522	626 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	VPS33	P20795	691 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	SPO11	P23179	398 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	RHB1	P25378	209 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	MVD1	P32377	396 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	GCD11	P32481	527 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	IMP3	P32899	183 aa	Predicted RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	CDS1	P38221	457 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	GDT1	P38301	280 aa	Predicted RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	ERC1	P38767	581 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	SUR2	P38992	349 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	YAR1	P46683	200 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	VMA10	P48836	114 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	YGL117W	P53133	265 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	YGR126W	P53274	230 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	ADY4	Q05955	493 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	YFH1	Q07540	174 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	YLR302C	O13544	120 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	RPS17A	P02407	136 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	AI1	P03875	834 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	RAD7	P06779	565 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	RPS17B	P14127	136 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	YAK1	P14680	807 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	ARG1	P22768	420 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	YCP4	P25349	247 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	MRT4	P33201	236 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	WBP1	P33767	430 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	YMR262W	P38430	313 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	SBE22	P38814	852 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	FMC1	P40491	155 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	REX4	Q08237	289 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	THI21	Q08975	551 aa		4.36	□□□□□ -1.71
BBC1	YJL020C	RRP12	Q12754	1228 aa	Known RBP	4.36	□□□□□ -1.71
BBC1	YJL020C	YLR278C	Q05854	1341 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	PMA1	P05030	918 aa	Known RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	HIP1	P06775	603 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	MET16	P18408	261 aa	Predicted RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	TFA2	P36145	328 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	AIM29	P36154	155 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	PPS1	P38148	807 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	POP7	P38291	140 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	EDC3	P39998	551 aa	Known RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	IST3	P40565	148 aa	Predicted RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	MPS2	P53159	387 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	DIP5	P53388	608 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	RCR2	Q03446	210 aa	Known RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	ARG7	Q04728	441 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	TDH2	P00358	332 aa	Known RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
BBC1	YJL020C	RPP2B	P02400	110 aa	Known RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	LEU4	P06208	619 aa	Known RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	DAL2	P25335	343 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	YME2	P32843	850 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	AUR1	P36107	401 aa	Predicted RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	RMD9	P53140	646 aa	Known RBP	4.35	□□□□□ -1.71
BBC1	YJL020C	MAL13	P53338	473 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	HDA1	P53973	706 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	SPC24	Q04477	213 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	TRE1	Q08919	783 aa		4.35	□□□□□ -1.71
BBC1	YJL020C	SCH9	P11792	824 aa	Known RBP	4.34	□□□□□ -1.71
BBC1	YJL020C	KGD1	P20967	1014 aa	Known RBP	4.34	□□□□□ -1.71
BBC1	YJL020C	IDH2	P28241	369 aa	Known RBP	4.34	□□□□□ -1.71
BBC1	YJL020C	CYM1	P32898	989 aa		4.34	□□□□□ -1.71
BBC1	YJL020C	CMC1	P36064	111 aa		4.34	□□□□□ -1.71
BBC1	YJL020C	NIT3	P49954	291 aa		4.34	□□□□□ -1.71
BBC1	YJL020C	SLX9	P53251	210 aa	Predicted RBP	4.34	□□□□□ -1.71
BBC1	YJL020C	YNR040W	P53736	256 aa		4.34	□□□□□ -1.71
BBC1	YJL020C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms