RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	SER33	P40510	469 aa		2.17	□□□□□ -2.06
STH1	YIL126W	COS4	P43542	379 aa		2.17	□□□□□ -2.06
STH1	YIL126W	HXT10	P43581	546 aa		2.17	□□□□□ -2.06
STH1	YIL126W	EMC2	P47133	292 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	MSE1	P48525	536 aa		2.17	□□□□□ -2.06
STH1	YIL126W	LYS20	P48570	428 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	SDT1	P53078	280 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RCF2	P53721	224 aa		2.17	□□□□□ -2.06
STH1	YIL126W	COS1	P53822	381 aa		2.17	□□□□□ -2.06
STH1	YIL126W	KIN4	Q01919	800 aa		2.17	□□□□□ -2.06
STH1	YIL126W	LRS4	Q04087	347 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	EMI2	Q04409	500 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	PRM6	Q04705	352 aa		2.17	□□□□□ -2.06
STH1	YIL126W	CDC123	Q05791	360 aa		2.17	□□□□□ -2.06
STH1	YIL126W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
STH1	YIL126W	MLH2	Q07980	695 aa		2.17	□□□□□ -2.06
STH1	YIL126W	OSW1	Q08692	278 aa		2.17	□□□□□ -2.06
STH1	YIL126W	HNT3	Q08702	217 aa		2.17	□□□□□ -2.06
STH1	YIL126W	PIN2	Q12057	282 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RRP12	Q12754	1228 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	MHF1	Q3E835	90 aa		2.17	□□□□□ -2.06
STH1	YIL126W	ILV1	P00927	576 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	TUB2	P02557	457 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	GAL4	P04386	881 aa		2.17	□□□□□ -2.06
STH1	YIL126W	DST1	P07273	309 aa		2.17	□□□□□ -2.06
STH1	YIL126W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
STH1	YIL126W	CDC6	P09119	513 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RPL4A	P10664	362 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	PHO8	P11491	566 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RIT1	P23796	513 aa		2.17	□□□□□ -2.06
STH1	YIL126W	MNE1	P24720	663 aa		2.17	□□□□□ -2.06
STH1	YIL126W	NPP1	P25353	742 aa		2.17	□□□□□ -2.06
STH1	YIL126W	PUT3	P25502	979 aa	Predicted RBP	2.17	□□□□□ -2.06
STH1	YIL126W	VMA5	P31412	392 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	NTH1	P32356	751 aa		2.17	□□□□□ -2.06
STH1	YIL126W	COT1	P32798	439 aa		2.17	□□□□□ -2.06
STH1	YIL126W	SUR1	P33300	382 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RPF2	P36160	344 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	ADE17	P38009	592 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	COS111	P38308	924 aa		2.17	□□□□□ -2.06
STH1	YIL126W	LEU5	P38702	357 aa		2.17	□□□□□ -2.06
STH1	YIL126W	OSH7	P38755	437 aa		2.17	□□□□□ -2.06
STH1	YIL126W	CRG1	P38892	291 aa	RIP-Chip data	2.17	□□□□□ -2.06	not detected
STH1	YIL126W	TPA1	P40032	644 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	NUP82	P40368	713 aa		2.17	□□□□□ -2.06
STH1	YIL126W	CIN1	P40987	1014 aa		2.17	□□□□□ -2.06
STH1	YIL126W	YJL055W	P47044	245 aa		2.17	□□□□□ -2.06
STH1	YIL126W	TIM54	P47045	478 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RPL4B	P49626	362 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	RNH70	P53331	553 aa		2.17	□□□□□ -2.06
STH1	YIL126W	ARC35	P53731	342 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	YNL146W	P53906	100 aa		2.17	□□□□□ -2.06
STH1	YIL126W	UME1	Q03010	460 aa		2.17	□□□□□ -2.06
STH1	YIL126W	COX20	Q04935	205 aa		2.17	□□□□□ -2.06
STH1	YIL126W	GMC2	Q06201	188 aa		2.17	□□□□□ -2.06
STH1	YIL126W	YPR091C	Q06833	770 aa		2.17	□□□□□ -2.06
STH1	YIL126W	ENT4	Q07872	247 aa		2.17	□□□□□ -2.06
STH1	YIL126W	UAF30	Q08747	228 aa		2.17	□□□□□ -2.06
STH1	YIL126W	Q0010	Q9ZZX9	128 aa		2.17	□□□□□ -2.06
STH1	YIL126W	SUC2	P00724	532 aa		2.17	□□□□□ -2.06
STH1	YIL126W	YPT1	P01123	206 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	GAL1	P04385	528 aa		2.17	□□□□□ -2.06
STH1	YIL126W	PUT2	P07275	575 aa		2.17	□□□□□ -2.06
STH1	YIL126W	SRV2	P17555	526 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	CKA2	P19454	339 aa		2.17	□□□□□ -2.06
STH1	YIL126W	ILV6	P25605	309 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	MRP4	P32902	394 aa		2.17	□□□□□ -2.06
STH1	YIL126W	STV1	P37296	890 aa		2.17	□□□□□ -2.06
STH1	YIL126W	MAL33	P38157	468 aa		2.17	□□□□□ -2.06
STH1	YIL126W	TSL1	P38427	1098 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	MSG5	P38590	489 aa		2.17	□□□□□ -2.06
STH1	YIL126W	AST2	P39945	430 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	ERG10	P41338	398 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	AGX1	P43567	385 aa		2.17	□□□□□ -2.06
STH1	YIL126W	YAR1	P46683	200 aa		2.17	□□□□□ -2.06
STH1	YIL126W	SEH1	P53011	349 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	PPT1	P53043	513 aa		2.17	□□□□□ -2.06
STH1	YIL126W	MND1	P53102	219 aa		2.17	□□□□□ -2.06
STH1	YIL126W	JAC1	P53193	184 aa		2.17	□□□□□ -2.06
STH1	YIL126W	PEX31	P53203	462 aa		2.17	□□□□□ -2.06
STH1	YIL126W	YGR054W	P53235	642 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	CAF40	P53829	373 aa		2.17	□□□□□ -2.06
STH1	YIL126W	NAM8	Q00539	523 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	ACS1	Q01574	713 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RPS15	Q01855	142 aa	Known RBP	2.17	□□□□□ -2.06
STH1	YIL126W	CSI1	Q04368	295 aa		2.17	□□□□□ -2.06
STH1	YIL126W	PNP1	Q05788	311 aa		2.17	□□□□□ -2.06
STH1	YIL126W	RCL1	Q08096	367 aa	Predicted RBP	2.17	□□□□□ -2.06
STH1	YIL126W	MLH3	Q12083	715 aa		2.17	□□□□□ -2.06
STH1	YIL126W	AEP3	Q12089	606 aa		2.17	□□□□□ -2.06
STH1	YIL126W	MED1	Q12321	566 aa		2.17	□□□□□ -2.06
STH1	YIL126W	GPM1	P00950	247 aa	Known RBP	2.16	□□□□□ -2.06
STH1	YIL126W	SCEI	P03882	235 aa		2.16	□□□□□ -2.06
STH1	YIL126W	PHO13	P19881	312 aa		2.16	□□□□□ -2.06
STH1	YIL126W	DAL82	P21705	255 aa		2.16	□□□□□ -2.06
STH1	YIL126W	RER1	P25560	188 aa		2.16	□□□□□ -2.06
STH1	YIL126W	NAM7	P30771	971 aa	Known RBP	2.16	□□□□□ -2.06
STH1	YIL126W	DGR2	P32330	852 aa		2.16	□□□□□ -2.06
STH1	YIL126W	CDC12	P32468	407 aa	Known RBP	2.16	□□□□□ -2.06
STH1	YIL126W	DOA4	P32571	926 aa		2.16	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms