RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene SDS3, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS3	YIL084C	YNL181W	P53878	407 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	ARP9	Q05123	467 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	ATG26	Q06321	1198 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	DSE3	Q08729	430 aa		4.11	□□□□□ -1.75
SDS3	YIL084C	MF(ALPHA)1	P01149	165 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	SGF29	P25554	259 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	PGS1	P25578	521 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	PEP3	P27801	918 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	RPN12	P32496	274 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	ANS1	P38832	159 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	PCL6	P40038	420 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	ERG26	P53199	349 aa	Known RBP	4.1	□□□□□ -1.75
SDS3	YIL084C	EFM6	P53970	246 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	MPS1	P54199	764 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	NGL3	Q03210	505 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	LUC7	Q07508	261 aa	Predicted RBP	4.1	□□□□□ -1.75
SDS3	YIL084C	YDL218W	Q07629	317 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	GRC3	Q07845	632 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	TEN1	Q07921	160 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	FMP40	Q08968	688 aa	Predicted RBP	4.1	□□□□□ -1.75
SDS3	YIL084C	TAH18	Q12181	623 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	MED1	Q12321	566 aa		4.1	□□□□□ -1.75
SDS3	YIL084C	GCN4	P03069	281 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	RPL42A	P0CX27	106 aa	Known RBP	4.09	□□□□□ -1.75
SDS3	YIL084C	RPL42B	P0CX28	106 aa	Known RBP	4.09	□□□□□ -1.75
SDS3	YIL084C	OLE1	P21147	510 aa	Known RBP	4.09	□□□□□ -1.75
SDS3	YIL084C	SSE2	P32590	693 aa	Known RBP	4.09	□□□□□ -1.75
SDS3	YIL084C	ATO2	P32907	282 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	GCS1	P35197	352 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	ICS2	P38284	255 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	CSM2	P40465	213 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	HXT9	P40885	567 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	IAH1	P41734	238 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	LCL3	P53153	274 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	COG4	Q06096	861 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	MMR1	Q06324	491 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	YEH1	Q07804	573 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	SPE4	Q12455	300 aa		4.09	□□□□□ -1.75
SDS3	YIL084C	YPT1	P01123	206 aa	Known RBP	4.08	□□□□□ -1.76
SDS3	YIL084C	BOS1	P25385	244 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	IMG1	P25626	169 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	CMK1	P27466	446 aa	Known RBP	4.08	□□□□□ -1.76
SDS3	YIL084C	ANP1	P32629	500 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	YKL100C	P34248	587 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	YPK3	P38070	525 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	RFS1	P38234	210 aa	Known RBP	4.08	□□□□□ -1.76
SDS3	YIL084C	SLX1	P38324	304 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	LEU5	P38702	357 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	YIL060W	P40519	144 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	MAF1	P41910	395 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	RMD8	P43620	662 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	YGR066C	P53242	292 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	LSB1	P53281	241 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	ADE13	Q05911	482 aa	Known RBP	4.08	□□□□□ -1.76
SDS3	YIL084C	MLH2	Q07980	695 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	RDR1	Q08904	546 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	YPL272C	Q08984	517 aa		4.08	□□□□□ -1.76
SDS3	YIL084C	PUT2	P07275	575 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	YBR144C	P34215	104 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	YBL055C	P34220	418 aa	Predicted RBP	4.07	□□□□□ -1.76
SDS3	YIL084C	COY1	P34237	679 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	ARP1	P38696	384 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	PHO90	P39535	881 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	ERP2	P39704	215 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	ESBP6	P53918	673 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	RPT6	Q01939	405 aa	Known RBP	4.07	□□□□□ -1.76
SDS3	YIL084C	YPL068C	Q02749	293 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	YLR281C	Q05863	155 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	TSR2	Q06672	205 aa	Known RBP	4.07	□□□□□ -1.76
SDS3	YIL084C	SNA4	Q07549	140 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	RRD2	Q12461	358 aa		4.07	□□□□□ -1.76
SDS3	YIL084C	TY1B-A	O13527	1196 aa	Known RBP	4.06	□□□□□ -1.76
SDS3	YIL084C	CBS1	P14066	229 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	EST1	P17214	699 aa	Predicted RBP	4.06	□□□□□ -1.76
SDS3	YIL084C	BUD5	P25300	642 aa	Predicted RBP	4.06	□□□□□ -1.76
SDS3	YIL084C	PDR3	P33200	976 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	SEF1	P34228	1148 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	MYO3	P36006	1272 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	UBP11	P36026	717 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	UBA4	P38820	440 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	RGI2	P40188	164 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	ALG5	P40350	334 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	MOB1	P40484	314 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	MRX6	P48564	524 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	RSM23	Q01163	450 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	EKI1	Q03764	534 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	YMR034C	Q05131	434 aa	Predicted RBP	4.06	□□□□□ -1.76
SDS3	YIL084C	HCR1	Q05775	265 aa	Known RBP	4.06	□□□□□ -1.76
SDS3	YIL084C	CDC45	Q08032	650 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	CIR2	Q08822	631 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	YJR112W-A	Q3E743	109 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	YPT6	Q99260	215 aa		4.06	□□□□□ -1.76
SDS3	YIL084C	APE1	P14904	514 aa		4.05	□□□□□ -1.76
SDS3	YIL084C	MET8	P15807	274 aa		4.05	□□□□□ -1.76
SDS3	YIL084C	KGD1	P20967	1014 aa	Known RBP	4.05	□□□□□ -1.76
SDS3	YIL084C	OCA4	P25366	362 aa		4.05	□□□□□ -1.76
SDS3	YIL084C	GID7	P25569	745 aa		4.05	□□□□□ -1.76
SDS3	YIL084C	CSE2	P33308	149 aa		4.05	□□□□□ -1.76
SDS3	YIL084C	ROT2	P38138	954 aa		4.05	□□□□□ -1.76
SDS3	YIL084C	YBR225W	P38321	900 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms