RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W NSE5Q03718 556 aa4.51□□□□□ -1.69
NMD3YHR170W CSN9Q03981 162 aa4.51□□□□□ -1.69
NMD3YHR170W RPN9Q04062 393 aaKnown RBP4.51□□□□□ -1.69
NMD3YHR170W MUS81Q04149 632 aaPredicted RBP4.51□□□□□ -1.69
NMD3YHR170W YKU80Q04437 629 aa4.51□□□□□ -1.69
NMD3YHR170W RTN1Q04947 295 aaKnown RBP4.51□□□□□ -1.69
NMD3YHR170W YDR286CQ05530 114 aa4.51□□□□□ -1.69
NMD3YHR170W CRN1Q06440 651 aa4.51□□□□□ -1.69
NMD3YHR170W YLR012CQ07927 99 aa4.51□□□□□ -1.69
NMD3YHR170W CHS5Q12114 671 aaKnown RBP4.51□□□□□ -1.69
NMD3YHR170W SCM3Q12334 223 aa4.51□□□□□ -1.69
NMD3YHR170W RMD5Q12508 421 aa4.51□□□□□ -1.69
NMD3YHR170W RGS2Q99188 309 aa4.51□□□□□ -1.69
NMD3YHR170W YPR117WQ06116 2489 aa4.5□□□□□ -1.69
NMD3YHR170W ATP12P22135 325 aa4.5□□□□□ -1.69
NMD3YHR170W ARG1P22768 420 aa4.5□□□□□ -1.69
NMD3YHR170W DCC1P25559 380 aa4.5□□□□□ -1.69
NMD3YHR170W KRR1P25586 316 aaPredicted RBP4.5□□□□□ -1.69
NMD3YHR170W RPC19P28000 142 aaKnown RBP4.5□□□□□ -1.69
NMD3YHR170W ASK1P35734 292 aa4.5□□□□□ -1.69
NMD3YHR170W MRPL40P36534 297 aa4.5□□□□□ -1.69
NMD3YHR170W MRP21P38175 177 aa4.5□□□□□ -1.69
NMD3YHR170W YSW1P38280 609 aa4.5□□□□□ -1.69
NMD3YHR170W ATG12P38316 186 aa4.5□□□□□ -1.69
NMD3YHR170W HSM3P38348 480 aa4.5□□□□□ -1.69
NMD3YHR170W YHR131CP38835 850 aa4.5□□□□□ -1.69
NMD3YHR170W STN1P38960 494 aa4.5□□□□□ -1.69
NMD3YHR170W MOB1P40484 314 aa4.5□□□□□ -1.69
NMD3YHR170W MAD3P47074 515 aa4.5□□□□□ -1.69
NMD3YHR170W BFA1P47113 574 aa4.5□□□□□ -1.69
NMD3YHR170W VEL1P53058 206 aa4.5□□□□□ -1.69
NMD3YHR170W YAP1802P53309 568 aa4.5□□□□□ -1.69
NMD3YHR170W PIR1Q03178 341 aa4.5□□□□□ -1.69
NMD3YHR170W CLU1Q03690 1277 aaKnown RBP4.5□□□□□ -1.69
NMD3YHR170W SEG1Q04279 960 aa4.5□□□□□ -1.69
NMD3YHR170W LDB18Q07887 179 aa4.5□□□□□ -1.69
NMD3YHR170W CMS1Q07897 291 aaKnown RBP4.5□□□□□ -1.69
NMD3YHR170W SGO1Q08490 590 aa4.5□□□□□ -1.69
NMD3YHR170W YLR046CQ12253 270 aa4.5□□□□□ -1.69
NMD3YHR170W SPE4Q12455 300 aa4.5□□□□□ -1.69
NMD3YHR170W PEX11Q12462 236 aa4.5□□□□□ -1.69
NMD3YHR170W RPS21BQ3E754 87 aaKnown RBP4.5□□□□□ -1.69
NMD3YHR170W YDR034W-BQ6Q5X2 51 aa4.5□□□□□ -1.69
NMD3YHR170W SNT1P25357 1226 aa4.49□□□□□ -1.69
NMD3YHR170W GEX1P25596 615 aa4.49□□□□□ -1.69
NMD3YHR170W YCR099CP25657 155 aa4.49□□□□□ -1.69
NMD3YHR170W HRR25P29295 494 aaKnown RBP4.49□□□□□ -1.69
NMD3YHR170W MRPL9P31334 269 aa4.49□□□□□ -1.69
NMD3YHR170W PHA2P32452 334 aa4.49□□□□□ -1.69
NMD3YHR170W COY1P34237 679 aa4.49□□□□□ -1.69
NMD3YHR170W GEX2P36173 615 aa4.49□□□□□ -1.69
NMD3YHR170W RIM2P38127 377 aa4.49□□□□□ -1.69
NMD3YHR170W APM3P38153 483 aa4.49□□□□□ -1.69
NMD3YHR170W HEK2P38199 381 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
NMD3YHR170W SRP72P38688 640 aaKnown RBP4.49□□□□□ -1.69
NMD3YHR170W HXT6P39003 570 aaKnown RBP4.49□□□□□ -1.69
NMD3YHR170W HXT7P39004 570 aa4.49□□□□□ -1.69
NMD3YHR170W NOP16P40007 231 aaKnown RBP4.49□□□□□ -1.69
NMD3YHR170W RGI2P40188 164 aa4.49□□□□□ -1.69
NMD3YHR170W IST3P40565 148 aaPredicted RBP4.49□□□□□ -1.69
NMD3YHR170W RNR4P49723 345 aaKnown RBP4.49□□□□□ -1.69
NMD3YHR170W TAF6P53040 516 aa4.49□□□□□ -1.69
NMD3YHR170W ASI2P53895 289 aa4.49□□□□□ -1.69
NMD3YHR170W ARP4P80428 489 aa4.49□□□□□ -1.69
NMD3YHR170W TOF2Q02208 771 aa4.49□□□□□ -1.69
NMD3YHR170W TAF11Q04226 346 aa4.49□□□□□ -1.69
NMD3YHR170W TMN2Q04562 672 aa4.49□□□□□ -1.69
NMD3YHR170W UBX3Q12229 455 aa4.49□□□□□ -1.69
NMD3YHR170W YPT6Q99260 215 aa4.49□□□□□ -1.69
NMD3YHR170W STE2D6VTK4 431 aa4.48□□□□□ -1.69
NMD3YHR170W SCH9P11792 824 aaKnown RBP4.48□□□□□ -1.69
NMD3YHR170W GCY1P14065 312 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
NMD3YHR170W MET8P15807 274 aa4.48□□□□□ -1.69
NMD3YHR170W DAL81P21657 970 aa4.48□□□□□ -1.69
NMD3YHR170W PHO3P24031 467 aa4.48□□□□□ -1.69
NMD3YHR170W YSP3P25036 478 aa4.48□□□□□ -1.69
NMD3YHR170W SYN8P31377 255 aa4.48□□□□□ -1.69
NMD3YHR170W CCR4P31384 837 aaKnown RBP4.48□□□□□ -1.69
NMD3YHR170W AEP1P32493 518 aa4.48□□□□□ -1.69
NMD3YHR170W IMP3P32899 183 aaPredicted RBP4.48□□□□□ -1.69
NMD3YHR170W MED6P38782 295 aa4.48□□□□□ -1.69
NMD3YHR170W POP2P39008 433 aa4.48□□□□□ -1.69
NMD3YHR170W IRC24P40580 263 aa4.48□□□□□ -1.69
NMD3YHR170W VMA13P41807 478 aaKnown RBP4.48□□□□□ -1.69
NMD3YHR170W PFA3P42836 336 aa4.48□□□□□ -1.69
NMD3YHR170W BUD13P46947 266 aaPredicted RBP4.48□□□□□ -1.69
NMD3YHR170W MNN10P50108 393 aaKnown RBP4.48□□□□□ -1.69
NMD3YHR170W AIF1P52923 378 aa4.48□□□□□ -1.69
NMD3YHR170W EMC4P53073 190 aa4.48□□□□□ -1.69
NMD3YHR170W NOP15P53927 220 aaPredicted RBP4.48□□□□□ -1.69
NMD3YHR170W TIM10P87108 93 aa4.48□□□□□ -1.69
NMD3YHR170W YPL014WQ02606 381 aa4.48□□□□□ -1.69
NMD3YHR170W YMR155WQ03795 547 aa4.48□□□□□ -1.69
NMD3YHR170W GSF2Q04697 403 aaKnown RBP4.48□□□□□ -1.69
NMD3YHR170W YLR177WQ06251 628 aa4.48□□□□□ -1.69
NMD3YHR170W ENT4Q07872 247 aa4.48□□□□□ -1.69
NMD3YHR170W YPR089WO13585 888 aa4.48□□□□□ -1.69
NMD3YHR170W RAD3P06839 778 aa4.48□□□□□ -1.69
NMD3YHR170W SEC53P07283 254 aaKnown RBP4.48□□□□□ -1.69
NMD3YHR170W REV1P12689 985 aa4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms