RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W CUS2P53830 285 aaPredicted RBP6.56□□□□□ -1.36
NUP49YGL172W YNL010WP53981 241 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W REX2P54964 269 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W YML119WQ03208 357 aa6.56□□□□□ -1.36
NUP49YGL172W YPL245WQ12179 454 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W RIB2Q12362 591 aaKnown RBP6.56□□□□□ -1.36
NUP49YGL172W NHA1Q99271 985 aa6.56□□□□□ -1.36
NUP49YGL172W PRT1P06103 763 aaKnown RBP6.55□□□□□ -1.36
NUP49YGL172W RPS4AP0CX35 261 aaKnown RBP6.55□□□□□ -1.36
NUP49YGL172W RPS4BP0CX36 261 aaKnown RBP6.55□□□□□ -1.36
NUP49YGL172W KIN2P13186 1147 aaKnown RBP6.55□□□□□ -1.36
NUP49YGL172W HXT4P32467 576 aa6.55□□□□□ -1.36
NUP49YGL172W RMA1P36001 430 aaKnown RBP6.55□□□□□ -1.36
NUP49YGL172W HEK2P38199 381 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
NUP49YGL172W HXT6P39003 570 aaKnown RBP6.55□□□□□ -1.36
NUP49YGL172W HXT7P39004 570 aa6.55□□□□□ -1.36
NUP49YGL172W MET18P40469 1032 aa6.55□□□□□ -1.36
NUP49YGL172W MRPS18P42847 217 aa6.55□□□□□ -1.36
NUP49YGL172W ARE2P53629 642 aaKnown RBP6.55□□□□□ -1.36
NUP49YGL172W VHS1Q03785 461 aa6.55□□□□□ -1.36
NUP49YGL172W BNA5Q05979 453 aa6.55□□□□□ -1.36
NUP49YGL172W ESA1Q08649 445 aa6.55□□□□□ -1.36
NUP49YGL172W BRR1Q99177 341 aaPredicted RBP6.55□□□□□ -1.36
NUP49YGL172W CAR1P00812 333 aaKnown RBP6.54□□□□□ -1.36
NUP49YGL172W CMP2P14747 604 aa6.54□□□□□ -1.36
NUP49YGL172W EXO70P19658 623 aa6.54□□□□□ -1.36
NUP49YGL172W PRP6P19735 899 aaPredicted RBP6.54□□□□□ -1.36
NUP49YGL172W PRP4P20053 465 aaKnown RBP6.54□□□□□ -1.36
NUP49YGL172W NIP1P32497 812 aaKnown RBP6.54□□□□□ -1.36
NUP49YGL172W PTC1P35182 281 aa6.54□□□□□ -1.36
NUP49YGL172W BMT2P38278 337 aa6.54□□□□□ -1.36
NUP49YGL172W YHR033WP38690 423 aa6.54□□□□□ -1.36
NUP49YGL172W LYS1P38998 373 aaRIP-Chip data6.54□□□□□ -1.36not detected
NUP49YGL172W PLB1P39105 664 aa6.54□□□□□ -1.36
NUP49YGL172W CAB2P40506 365 aa6.54□□□□□ -1.36
NUP49YGL172W AZF1P41696 914 aa6.54□□□□□ -1.36
NUP49YGL172W FET5P43561 622 aa6.54□□□□□ -1.36
NUP49YGL172W YJR142WP47173 342 aa6.54□□□□□ -1.36
NUP49YGL172W LGE1Q02796 332 aaKnown RBP6.54□□□□□ -1.36
NUP49YGL172W GLO2Q05584 274 aa6.54□□□□□ -1.36
NUP49YGL172W SLF1Q12034 447 aaKnown RBP6.54□□□□□ -1.36
NUP49YGL172W HAL9Q12180 1030 aa6.54□□□□□ -1.36
NUP49YGL172W ATG34Q12292 412 aa6.54□□□□□ -1.36
NUP49YGL172W IRA2P19158 3079 aa6.54□□□□□ -1.36
NUP49YGL172W HXK2P04807 486 aaKnown RBP6.53□□□□□ -1.36
NUP49YGL172W MRPL33P20084 86 aa6.53□□□□□ -1.36
NUP49YGL172W RNQ1P25367 405 aa6.53□□□□□ -1.36
NUP49YGL172W GBP2P25555 427 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
NUP49YGL172W CWP1P28319 239 aa6.53□□□□□ -1.36
NUP49YGL172W NRP1P32770 719 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
NUP49YGL172W TOA1P32773 286 aa6.53□□□□□ -1.36
NUP49YGL172W CDC13P32797 924 aaKnown RBP6.53□□□□□ -1.36
NUP49YGL172W SFC1P33303 322 aa6.53□□□□□ -1.36
NUP49YGL172W RFC3P38629 340 aa6.53□□□□□ -1.36
NUP49YGL172W YHL008CP38750 627 aa6.53□□□□□ -1.36
NUP49YGL172W RGA1P39083 1007 aa6.53□□□□□ -1.36
NUP49YGL172W RHO3Q00245 231 aaKnown RBP6.53□□□□□ -1.36
NUP49YGL172W YMR111CQ04461 462 aaPredicted RBP6.53□□□□□ -1.36
NUP49YGL172W BSC2Q05611 235 aa6.53□□□□□ -1.36
NUP49YGL172W FAR10Q06001 478 aa6.53□□□□□ -1.36
NUP49YGL172W EAF1Q06337 982 aa6.53□□□□□ -1.36
NUP49YGL172W YEH2Q07950 538 aa6.53□□□□□ -1.36
NUP49YGL172W HUA2Q12134 243 aa6.53□□□□□ -1.36
NUP49YGL172W YOR114WQ12219 294 aa6.53□□□□□ -1.36
NUP49YGL172W YDR262WQ12331 272 aa6.53□□□□□ -1.36
NUP49YGL172W MHT1Q12525 324 aa6.53□□□□□ -1.36
NUP49YGL172W YLR111WQ12528 110 aa6.53□□□□□ -1.36
NUP49YGL172W YCL012CQ8J0M4 134 aa6.53□□□□□ -1.36
NUP49YGL172W AI3P03877 415 aa6.52□□□□□ -1.37
NUP49YGL172W DST1P07273 309 aa6.52□□□□□ -1.37
NUP49YGL172W LAT1P12695 482 aaKnown RBP6.52□□□□□ -1.37
NUP49YGL172W CDC34P14682 295 aa6.52□□□□□ -1.37
NUP49YGL172W SGV1P23293 657 aaKnown RBP6.52□□□□□ -1.37
NUP49YGL172W DBR1P24309 405 aaKnown RBP6.52□□□□□ -1.37
NUP49YGL172W GFD2P25370 566 aaKnown RBP6.52□□□□□ -1.37
NUP49YGL172W RAD14P28519 371 aa6.52□□□□□ -1.37
NUP49YGL172W EMC3P36039 253 aa6.52□□□□□ -1.37
NUP49YGL172W YBL029WP38201 376 aa6.52□□□□□ -1.37
NUP49YGL172W GGC1P38988 300 aa6.52□□□□□ -1.37
NUP49YGL172W FAA3P39002 694 aa6.52□□□□□ -1.37
NUP49YGL172W YEN1P40028 759 aa6.52□□□□□ -1.37
NUP49YGL172W LRO1P40345 661 aa6.52□□□□□ -1.37
NUP49YGL172W MEP2P41948 499 aa6.52□□□□□ -1.37
NUP49YGL172W YGR053CP53234 283 aa6.52□□□□□ -1.37
NUP49YGL172W SDH1Q00711 640 aa6.52□□□□□ -1.37
NUP49YGL172W ISU1Q03020 165 aa6.52□□□□□ -1.37
NUP49YGL172W MET31Q03081 177 aa6.52□□□□□ -1.37
NUP49YGL172W FMN1Q03778 218 aa6.52□□□□□ -1.37
NUP49YGL172W YET2Q04210 160 aa6.52□□□□□ -1.37
NUP49YGL172W YDL121CQ07541 149 aa6.52□□□□□ -1.37
NUP49YGL172W RPS21AP0C0V8 87 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W DAT1P13483 248 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W TYR1P20049 452 aa6.51□□□□□ -1.37
NUP49YGL172W OCA4P25366 362 aa6.51□□□□□ -1.37
NUP49YGL172W TRX3P25372 127 aa6.51□□□□□ -1.37
NUP49YGL172W MLS1P30952 554 aa6.51□□□□□ -1.37
NUP49YGL172W FUN30P31380 1131 aa6.51□□□□□ -1.37
NUP49YGL172W MVD1P32377 396 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W SKN1P33336 771 aa6.51□□□□□ -1.37
NUP49YGL172W SIP2P34164 415 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms