RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C TES1P41903 349 aaKnown RBP5.34□□□□□ -1.55
RPT6YGL048C CIS3P47001 227 aa5.34□□□□□ -1.55
RPT6YGL048C ABM1P47146 123 aa5.34□□□□□ -1.55
RPT6YGL048C MIG2P53035 382 aa5.34□□□□□ -1.55
RPT6YGL048C RTA1P53047 317 aa5.34□□□□□ -1.55
RPT6YGL048C LCL3P53153 274 aa5.34□□□□□ -1.55
RPT6YGL048C DCP2P53550 970 aaKnown RBP5.34□□□□□ -1.55
RPT6YGL048C YNL143CP53908 130 aa5.34□□□□□ -1.55
RPT6YGL048C SIW14P53965 281 aa5.34□□□□□ -1.55
RPT6YGL048C NUP100Q02629 959 aa5.34□□□□□ -1.55
RPT6YGL048C RSC3Q06639 885 aa5.34□□□□□ -1.55
RPT6YGL048C HBT1Q07653 1046 aaKnown RBP5.34□□□□□ -1.55
RPT6YGL048C SEC39Q12745 709 aa5.34□□□□□ -1.55
RPT6YGL048C TUB1P09733 447 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C TY1A-LR4P0C2I8 440 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C RPL1AP0CX43 217 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C RPL1BP0CX44 217 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C TY1A-DR6P0CX70 440 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-ER1P0CX71 440 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-LR2P0CX72 440 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-PLP0CX73 440 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-JR1P0CX74 440 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-LR3P0CX75 440 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-ML2P0CX76 440 aa5.33□□□□□ -1.56
RPT6YGL048C CDC24P11433 854 aaPredicted RBP5.33□□□□□ -1.56
RPT6YGL048C RPI1P23250 407 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C SNT1P25357 1226 aa5.33□□□□□ -1.56
RPT6YGL048C SED4P25365 1065 aa5.33□□□□□ -1.56
RPT6YGL048C DCC1P25559 380 aa5.33□□□□□ -1.56
RPT6YGL048C HMX1P32339 317 aa5.33□□□□□ -1.56
RPT6YGL048C TIF3P34167 436 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C SWH1P35845 1188 aa5.33□□□□□ -1.56
RPT6YGL048C NNK1P36003 928 aa5.33□□□□□ -1.56
RPT6YGL048C RRP3P38712 501 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C GND1P38720 489 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C LTP1P40347 161 aa5.33□□□□□ -1.56
RPT6YGL048C DSN1P40568 576 aa5.33□□□□□ -1.56
RPT6YGL048C IRC6P43615 237 aa5.33□□□□□ -1.56
RPT6YGL048C UPF3P48412 387 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C SWC4P53201 476 aa5.33□□□□□ -1.56
RPT6YGL048C FRE4P53746 719 aa5.33□□□□□ -1.56
RPT6YGL048C CIK1Q01649 594 aa5.33□□□□□ -1.56
RPT6YGL048C YPL109CQ02981 657 aa5.33□□□□□ -1.56
RPT6YGL048C RLI1Q03195 608 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C YMR160WQ03823 816 aa5.33□□□□□ -1.56
RPT6YGL048C YML096WQ04489 525 aa5.33□□□□□ -1.56
RPT6YGL048C SML1Q04964 104 aa5.33□□□□□ -1.56
RPT6YGL048C BRE4Q07660 1125 aa5.33□□□□□ -1.56
RPT6YGL048C VPS68Q12016 184 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-GR1Q12085 440 aa5.33□□□□□ -1.56
RPT6YGL048C RKM5Q12367 367 aa5.33□□□□□ -1.56
RPT6YGL048C RMD5Q12508 421 aa5.33□□□□□ -1.56
RPT6YGL048C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C TY1A-OLQ92392 440 aaKnown RBP5.33□□□□□ -1.56
RPT6YGL048C YOR019WQ99248 730 aa5.33□□□□□ -1.56
RPT6YGL048C CAR2P07991 424 aaKnown RBP5.32□□□□□ -1.56
RPT6YGL048C IMA3P0CW40 589 aa5.32□□□□□ -1.56
RPT6YGL048C IMA4P0CW41 589 aa5.32□□□□□ -1.56
RPT6YGL048C ENA1P13587 1091 aa5.32□□□□□ -1.56
RPT6YGL048C POL30P15873 258 aaKnown RBP5.32□□□□□ -1.56
RPT6YGL048C PRP6P19735 899 aaPredicted RBP5.32□□□□□ -1.56
RPT6YGL048C YSP3P25036 478 aa5.32□□□□□ -1.56
RPT6YGL048C GID7P25569 745 aa5.32□□□□□ -1.56
RPT6YGL048C EMC1P25574 760 aa5.32□□□□□ -1.56
RPT6YGL048C RFA2P26754 273 aaKnown RBP5.32□□□□□ -1.56
RPT6YGL048C SPS19P32573 292 aaKnown RBP5.32□□□□□ -1.56
RPT6YGL048C IML3P38265 245 aa5.32□□□□□ -1.56
RPT6YGL048C YBR259WP38338 688 aa5.32□□□□□ -1.56
RPT6YGL048C SEO1P39709 593 aa5.32□□□□□ -1.56
RPT6YGL048C MTW1P39731 289 aa5.32□□□□□ -1.56
RPT6YGL048C NOP16P40007 231 aaKnown RBP5.32□□□□□ -1.56
RPT6YGL048C IAH1P41734 238 aa5.32□□□□□ -1.56
RPT6YGL048C MRPS18P42847 217 aa5.32□□□□□ -1.56
RPT6YGL048C GCD14P46959 383 aaPredicted RBP5.32□□□□□ -1.56
RPT6YGL048C TAH11P47112 604 aa5.32□□□□□ -1.56
RPT6YGL048C APT1P49435 187 aaKnown RBP5.32□□□□□ -1.56
RPT6YGL048C TEL2P53038 688 aa5.32□□□□□ -1.56
RPT6YGL048C RPN14P53196 417 aa5.32□□□□□ -1.56
RPT6YGL048C ERP6P53198 216 aa5.32□□□□□ -1.56
RPT6YGL048C YGR067CP53243 804 aa5.32□□□□□ -1.56
RPT6YGL048C NRM1P53718 249 aa5.32□□□□□ -1.56
RPT6YGL048C ENA2Q01896 1091 aa5.32□□□□□ -1.56
RPT6YGL048C RPM2Q02773 1202 aa5.32□□□□□ -1.56
RPT6YGL048C YPL071CQ02864 156 aa5.32□□□□□ -1.56
RPT6YGL048C ECI1Q05871 280 aa5.32□□□□□ -1.56
RPT6YGL048C BLS1Q06071 122 aa5.32□□□□□ -1.56
RPT6YGL048C UTP21Q06078 939 aaPredicted RBP5.32□□□□□ -1.56
RPT6YGL048C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
RPT6YGL048C RRT8Q08219 342 aa5.32□□□□□ -1.56
RPT6YGL048C IMA2Q08295 589 aa5.32□□□□□ -1.56
RPT6YGL048C SLD7Q08457 257 aa5.32□□□□□ -1.56
RPT6YGL048C ALG6Q12001 544 aaKnown RBP5.32□□□□□ -1.56
RPT6YGL048C AIM41Q12032 185 aa5.32□□□□□ -1.56
RPT6YGL048C PFK27Q12471 397 aaPredicted RBP5.32□□□□□ -1.56
RPT6YGL048C ENA5Q12691 1091 aa5.32□□□□□ -1.56
RPT6YGL048C GAL4P04386 881 aa5.31□□□□□ -1.56
RPT6YGL048C GAL7P08431 366 aa5.31□□□□□ -1.56
RPT6YGL048C YML002WP0CF17 737 aa5.31□□□□□ -1.56
RPT6YGL048C EPT1P22140 391 aa5.31□□□□□ -1.56
RPT6YGL048C PPH21P23594 369 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms