RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W YIL161WP40449 235 aaKnown RBP5.14□□□□□ -1.59
UBP9YER098W BAP3P41815 604 aa5.14□□□□□ -1.59
UBP9YER098W YFL064CP43540 174 aa5.14□□□□□ -1.59
UBP9YER098W LAM5P43560 674 aa5.14□□□□□ -1.59
UBP9YER098W SNX4P47057 423 aa5.14□□□□□ -1.59
UBP9YER098W LCL3P53153 274 aa5.14□□□□□ -1.59
UBP9YER098W CWC25P53854 179 aaKnown RBP5.14□□□□□ -1.59
UBP9YER098W SHR3Q02774 210 aa5.14□□□□□ -1.59
UBP9YER098W SKI8Q02793 397 aaPredicted RBP5.14□□□□□ -1.59
UBP9YER098W ABZ2Q03266 374 aa5.14□□□□□ -1.59
UBP9YER098W FMP42Q04991 504 aa5.14□□□□□ -1.59
UBP9YER098W BCP1Q06338 283 aa5.14□□□□□ -1.59
UBP9YER098W PGC1Q08959 321 aa5.14□□□□□ -1.59
UBP9YER098W EMP46Q12396 444 aa5.14□□□□□ -1.59
UBP9YER098W NOT5Q12514 560 aaPredicted RBP5.14□□□□□ -1.59
UBP9YER098W YBL111CQ3E7Y5 667 aa5.14□□□□□ -1.59
UBP9YER098W YOR019WQ99248 730 aa5.14□□□□□ -1.59
UBP9YER098W ALG1P16661 449 aa5.14□□□□□ -1.59
UBP9YER098W MNE1P24720 663 aa5.14□□□□□ -1.59
UBP9YER098W GBP2P25555 427 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
UBP9YER098W ADK2P26364 225 aa5.14□□□□□ -1.59
UBP9YER098W URK1P27515 501 aa5.14□□□□□ -1.59
UBP9YER098W PEX2P32800 271 aa5.14□□□□□ -1.59
UBP9YER098W REG2P38232 338 aa5.14□□□□□ -1.59
UBP9YER098W VHC1P38329 1120 aa5.14□□□□□ -1.59
UBP9YER098W PIG2P40187 538 aa5.14□□□□□ -1.59
UBP9YER098W FMP32P43557 207 aa5.14□□□□□ -1.59
UBP9YER098W TOS3P43637 560 aa5.14□□□□□ -1.59
UBP9YER098W LSC1P53598 329 aaKnown RBP5.14□□□□□ -1.59
UBP9YER098W MTG1Q03151 367 aaPredicted RBP5.14□□□□□ -1.59
UBP9YER098W GLO2Q05584 274 aa5.14□□□□□ -1.59
UBP9YER098W YPR078CQ06813 372 aa5.14□□□□□ -1.59
UBP9YER098W ASA1Q06822 443 aa5.14□□□□□ -1.59
UBP9YER098W RXT3Q07458 294 aa5.14□□□□□ -1.59
UBP9YER098W FKS3Q04952 1785 aa5.14□□□□□ -1.59
UBP9YER098W LAT1P12695 482 aaKnown RBP5.13□□□□□ -1.59
UBP9YER098W COQ1P18900 473 aa5.13□□□□□ -1.59
UBP9YER098W HSP30P25619 332 aa5.13□□□□□ -1.59
UBP9YER098W YCR061WP25639 631 aa5.13□□□□□ -1.59
UBP9YER098W RAD14P28519 371 aa5.13□□□□□ -1.59
UBP9YER098W MSS1P32559 526 aaPredicted RBP5.13□□□□□ -1.59
UBP9YER098W SAS3P34218 831 aa5.13□□□□□ -1.59
UBP9YER098W GCS1P35197 352 aa5.13□□□□□ -1.59
UBP9YER098W GEX2P36173 615 aa5.13□□□□□ -1.59
UBP9YER098W PLB1P39105 664 aa5.13□□□□□ -1.59
UBP9YER098W ICP55P40051 511 aa5.13□□□□□ -1.59
UBP9YER098W RGI2P40188 164 aa5.13□□□□□ -1.59
UBP9YER098W PAN2P53010 1115 aaPredicted RBP5.13□□□□□ -1.59
UBP9YER098W YGL108CP53139 140 aa5.13□□□□□ -1.59
UBP9YER098W AIM32Q04689 311 aa5.13□□□□□ -1.59
UBP9YER098W COX20Q04935 205 aa5.13□□□□□ -1.59
UBP9YER098W YPR172WQ06608 200 aa5.13□□□□□ -1.59
UBP9YER098W MF(ALPHA)1P01149 165 aa5.13□□□□□ -1.59
UBP9YER098W PEP5P12868 1029 aa5.13□□□□□ -1.59
UBP9YER098W MSG5P38590 489 aa5.13□□□□□ -1.59
UBP9YER098W SPC97P38863 823 aa5.13□□□□□ -1.59
UBP9YER098W DIE2P50076 525 aa5.13□□□□□ -1.59
UBP9YER098W FMN1Q03778 218 aa5.13□□□□□ -1.59
UBP9YER098W PAR32Q12515 295 aaKnown RBP5.13□□□□□ -1.59
UBP9YER098W CET1O13297 549 aaPredicted RBP5.12□□□□□ -1.59
UBP9YER098W RPL6BP05739 176 aaKnown RBP5.12□□□□□ -1.59
UBP9YER098W SMI1P32566 505 aa5.12□□□□□ -1.59
UBP9YER098W YKL100CP34248 587 aa5.12□□□□□ -1.59
UBP9YER098W CUE2P36075 443 aaKnown RBP5.12□□□□□ -1.59
UBP9YER098W STB6P36085 766 aa5.12□□□□□ -1.59
UBP9YER098W MNN2P38069 597 aa5.12□□□□□ -1.59
UBP9YER098W YBR139WP38109 508 aa5.12□□□□□ -1.59
UBP9YER098W DOT5P40553 215 aa5.12□□□□□ -1.59
UBP9YER098W LCB2P40970 561 aa5.12□□□□□ -1.59
UBP9YER098W GCD14P46959 383 aaPredicted RBP5.12□□□□□ -1.59
UBP9YER098W NUP84P52891 726 aa5.12□□□□□ -1.59
UBP9YER098W MIG2P53035 382 aa5.12□□□□□ -1.59
UBP9YER098W RTC4P53850 401 aa5.12□□□□□ -1.59
UBP9YER098W REX2P54964 269 aaKnown RBP5.12□□□□□ -1.59
UBP9YER098W SED5Q01590 340 aa5.12□□□□□ -1.59
UBP9YER098W YDL114WQ07530 308 aa5.12□□□□□ -1.59
UBP9YER098W SWT1Q12104 458 aa5.12□□□□□ -1.59
UBP9YER098W SPE4Q12455 300 aa5.12□□□□□ -1.59
UBP9YER098W ADF1Q2V2Q1 113 aa5.12□□□□□ -1.59
UBP9YER098W YPR053CQ6Q5F3 151 aa5.12□□□□□ -1.59
UBP9YER098W TRP3P00937 484 aa5.12□□□□□ -1.59
UBP9YER098W GPA2P10823 449 aa5.12□□□□□ -1.59
UBP9YER098W NMT1P14743 455 aa5.12□□□□□ -1.59
UBP9YER098W HEM15P16622 393 aa5.12□□□□□ -1.59
UBP9YER098W STE50P25344 346 aa5.12□□□□□ -1.59
UBP9YER098W ACP1P32463 125 aa5.12□□□□□ -1.59
UBP9YER098W MDL1P33310 695 aa5.12□□□□□ -1.59
UBP9YER098W RRT2P38332 387 aa5.12□□□□□ -1.59
UBP9YER098W HIS2P38635 335 aa5.12□□□□□ -1.59
UBP9YER098W RPH1P39956 796 aa5.12□□□□□ -1.59
UBP9YER098W EMC2P47133 292 aaKnown RBP5.12□□□□□ -1.59
UBP9YER098W LYS4P49367 693 aaPredicted RBP5.12□□□□□ -1.59
UBP9YER098W DIP5P53388 608 aa5.12□□□□□ -1.59
UBP9YER098W GCN5Q03330 439 aa5.12□□□□□ -1.59
UBP9YER098W ACK1Q07622 623 aaPredicted RBP5.12□□□□□ -1.59
UBP9YER098W ATP16Q12165 160 aa5.12□□□□□ -1.59
UBP9YER098W YBR298C-AQ8TGK4 73 aa5.12□□□□□ -1.59
UBP9YER098W EXO70P19658 623 aa5.11□□□□□ -1.59
UBP9YER098W MEI4P29467 408 aa5.11□□□□□ -1.59
UBP9YER098W AUR1P36107 401 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms