RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG3	YDR504C	PUP3	P25451	205 aa	Known RBP	0.93	□□□□□ -2.26
SPG3	YDR504C	YKL133C	P36066	463 aa		0.93	□□□□□ -2.26
SPG3	YDR504C	ICS2	P38284	255 aa		0.93	□□□□□ -2.26
SPG3	YDR504C	SLZ1	P40167	298 aa		0.93	□□□□□ -2.26
SPG3	YDR504C	ARC35	P53731	342 aa	Known RBP	0.93	□□□□□ -2.26
SPG3	YDR504C	HSH49	Q99181	213 aa	Predicted RBP	0.93	□□□□□ -2.26
SPG3	YDR504C	SUI2	P20459	304 aa	Known RBP	0.92	□□□□□ -2.26
SPG3	YDR504C	YCK1	P23291	538 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	VMA16	P23968	213 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	SPS22	P25380	463 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	BUB3	P26449	341 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	UME6	P39001	836 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	YGR018C	P53211	109 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	CRH1	P53301	507 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	HXT11	P54862	567 aa		0.92	□□□□□ -2.26
SPG3	YDR504C	IMG1	P25626	169 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	SMY1	P32364	656 aa	Known RBP	0.91	□□□□□ -2.26
SPG3	YDR504C	ALY1	P36117	915 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	GRX7	P38068	203 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	YBR225W	P38321	900 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	MIG3	P39943	394 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	DFG10	P40526	253 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	PCP1	P53259	346 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	MKC7	P53379	596 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	EFM6	P53970	246 aa		0.91	□□□□□ -2.26
SPG3	YDR504C	YLR302C	O13544	120 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	ADH1	P00330	348 aa	Known RBP	0.9	□□□□□ -2.27
SPG3	YDR504C	MES1	P00958	751 aa	Known RBP	0.9	□□□□□ -2.27
SPG3	YDR504C	NUC1	P08466	329 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	SPO7	P18410	259 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	DTR1	P38125	572 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	RIB5	P38145	238 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	YPS6	P40583	537 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	OGG1	P53397	376 aa	Predicted RBP	0.9	□□□□□ -2.27
SPG3	YDR504C	MRPS16	Q02608	121 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	TFC6	Q06339	672 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	AHC1	Q12433	566 aa		0.9	□□□□□ -2.27
SPG3	YDR504C	RPB2	P08518	1224 aa	Known RBP	0.89	□□□□□ -2.27
SPG3	YDR504C	YCR100C	P25606	316 aa		0.89	□□□□□ -2.27
SPG3	YDR504C	POP5	P28005	173 aa		0.89	□□□□□ -2.27
SPG3	YDR504C	CSE2	P33308	149 aa		0.89	□□□□□ -2.27
SPG3	YDR504C	TCM62	P38228	572 aa	Known RBP	0.89	□□□□□ -2.27
SPG3	YDR504C	TAN1	P53072	289 aa	Predicted RBP	0.89	□□□□□ -2.27
SPG3	YDR504C	PAP2	P53632	584 aa	Known RBP	0.89	□□□□□ -2.27
SPG3	YDR504C	ODC1	Q03028	310 aa		0.89	□□□□□ -2.27
SPG3	YDR504C	THP1	Q08231	455 aa		0.89	□□□□□ -2.27
SPG3	YDR504C	RRD2	Q12461	358 aa		0.89	□□□□□ -2.27
SPG3	YDR504C	UBC1	P21734	215 aa	Known RBP	0.88	□□□□□ -2.27
SPG3	YDR504C	MFT1	P33441	392 aa	Known RBP	0.88	□□□□□ -2.27
SPG3	YDR504C	BNA4	P38169	460 aa		0.88	□□□□□ -2.27
SPG3	YDR504C	RRT6	P53117	311 aa	Predicted RBP	0.88	□□□□□ -2.27
SPG3	YDR504C	YGR127W	P53275	312 aa		0.88	□□□□□ -2.27
SPG3	YDR504C	MET14	Q02196	202 aa		0.88	□□□□□ -2.27
SPG3	YDR504C	GAL1	P04385	528 aa		0.87	□□□□□ -2.27
SPG3	YDR504C	CYS4	P32582	507 aa	Known RBP	0.87	□□□□□ -2.27
SPG3	YDR504C	SPT10	P35208	640 aa		0.87	□□□□□ -2.27
SPG3	YDR504C	PTK1	P36002	662 aa	Predicted RBP	0.87	□□□□□ -2.27
SPG3	YDR504C	CIN4	P39110	191 aa		0.87	□□□□□ -2.27
SPG3	YDR504C	ISC1	P40015	477 aa	Known RBP	0.87	□□□□□ -2.27
SPG3	YDR504C	LYS4	P49367	693 aa	Predicted RBP	0.87	□□□□□ -2.27
SPG3	YDR504C	APT1	P49435	187 aa	Known RBP	0.87	□□□□□ -2.27
SPG3	YDR504C	YDR239C	Q03780	787 aa		0.87	□□□□□ -2.27
SPG3	YDR504C	RAX2	Q12465	1220 aa		0.87	□□□□□ -2.27
SPG3	YDR504C	CYC3	P06182	269 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	MTF2	P10849	440 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	IES6	P32617	166 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	YME2	P32843	850 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	SHP1	P34223	423 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	YBR137W	P38276	179 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	FAR3	P46671	204 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	MRPL13	Q02204	264 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	PPM1	Q04081	328 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	PLP2	Q12017	286 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	RAD61	Q99359	647 aa		0.86	□□□□□ -2.27
SPG3	YDR504C	MRP20	P32387	263 aa		0.85	□□□□□ -2.27
SPG3	YDR504C	MST28	P39552	234 aa		0.85	□□□□□ -2.27
SPG3	YDR504C	PGU1	P47180	361 aa		0.85	□□□□□ -2.27
SPG3	YDR504C	HEF3	P53978	1044 aa	Known RBP	0.85	□□□□□ -2.27
SPG3	YDR504C	MRP51	Q02950	344 aa		0.85	□□□□□ -2.27
SPG3	YDR504C	YPR195C	Q06594	109 aa		0.85	□□□□□ -2.27
SPG3	YDR504C	DNL4	Q08387	944 aa	Predicted RBP	0.85	□□□□□ -2.27
SPG3	YDR504C	CBP6	P07253	162 aa	Predicted RBP	0.84	□□□□□ -2.27
SPG3	YDR504C	OLE1	P21147	510 aa	Known RBP	0.84	□□□□□ -2.27
SPG3	YDR504C	KAR9	P32526	644 aa		0.84	□□□□□ -2.27
SPG3	YDR504C	REC114	P32841	428 aa		0.84	□□□□□ -2.27
SPG3	YDR504C	TEF4	P36008	412 aa	Known RBP	0.84	□□□□□ -2.27
SPG3	YDR504C	PRY2	P36110	329 aa		0.84	□□□□□ -2.27
SPG3	YDR504C	TRS85	P46944	698 aa		0.84	□□□□□ -2.27
SPG3	YDR504C	ZPR1	P53303	486 aa	Known RBP	0.84	□□□□□ -2.27
SPG3	YDR504C	RCO1	Q04779	684 aa		0.84	□□□□□ -2.27
SPG3	YDR504C	TY1B-A	O13527	1196 aa	Known RBP	0.83	□□□□□ -2.28
SPG3	YDR504C	COX4	P04037	155 aa		0.83	□□□□□ -2.28
SPG3	YDR504C	YAR066W	P0CX18	203 aa		0.83	□□□□□ -2.28
SPG3	YDR504C	YHR214W	P0CX19	203 aa		0.83	□□□□□ -2.28
SPG3	YDR504C	ART10	P18634	518 aa	Known RBP	0.83	□□□□□ -2.28
SPG3	YDR504C	YBR144C	P34215	104 aa		0.83	□□□□□ -2.28
SPG3	YDR504C	COQ9	Q05779	260 aa		0.83	□□□□□ -2.28
SPG3	YDR504C	LIP2	Q06005	328 aa		0.83	□□□□□ -2.28
SPG3	YDR504C	RIX7	Q07844	837 aa	Known RBP	0.83	□□□□□ -2.28
SPG3	YDR504C	UBP11	P36026	717 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms