RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene CNL1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CNL1	YDR357C	RPL27B	P0C2H7	136 aa	Known RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	SCH9	P11792	824 aa	Known RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	SAG1	P20840	650 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	ADH7	P25377	361 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	PBN1	P25580	416 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	PPA2	P28239	310 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	ICL1	P28240	557 aa	Predicted RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	YBR139W	P38109	508 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	PCL6	P40038	420 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	AGE2	P40529	298 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	IME4	P41833	600 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	MAF1	P41910	395 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	TMA22	P47089	198 aa	Predicted RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	GCV1	P48015	400 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	BIO3	P50277	480 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	ARI1	P53111	347 aa	Known RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	SLX9	P53251	210 aa	Predicted RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	CUS2	P53830	285 aa	Predicted RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	VAC7	P53950	1165 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	DIA1	P54005	336 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	RNT1	Q02555	471 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	LEE1	Q02799	301 aa	Known RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	TRS31	Q03337	283 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	CAB5	Q03941	241 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	YMR130W	Q04223	302 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	YLR283W	Q05867	314 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	ARO10	Q06408	635 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	NDL1	Q06568	189 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	YPR078C	Q06813	372 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	AIM6	Q07716	390 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	BSC6	Q08280	497 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	RDR1	Q08904	546 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	SVS1	Q12254	260 aa		4.64	□□□□□ -1.67
CNL1	YDR357C	PNO1	Q99216	274 aa	Known RBP	4.64	□□□□□ -1.67
CNL1	YDR357C	SKI3	P17883	1432 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	GEA2	P39993	1459 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	YBR085C-A	O43137	85 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	GAL4	P04386	881 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	ILV2	P07342	687 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	SEC12	P11655	471 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	KIN2	P13186	1147 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	PDA1	P16387	420 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	RPS7A	P26786	190 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	PRR1	P28708	518 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	TPS2	P31688	896 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	TYE7	P33122	291 aa	Predicted RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	WBP1	P33767	430 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	TUL1	P36096	758 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	TCD2	P36101	447 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	YKR073C	P36153	106 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	YMR262W	P38430	313 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	SAP1	P39955	897 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	CTK2	P46962	323 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	YJL045W	P47052	634 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	COS5	P47187	383 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	STR3	P53101	465 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	LSG1	P53145	640 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	PXR1	P53335	271 aa	Predicted RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	SOK2	P53438	785 aa	Predicted RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	DBP6	P53734	629 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	YKR011C	Q02209	353 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	FIN1	Q03898	291 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	ARP10	Q04549	284 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	RSA3	Q05942	220 aa	Known RBP	4.63	□□□□□ -1.67
CNL1	YDR357C	STE23	Q06010	1027 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	COS7	Q07788	383 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	YDL109C	Q12103	647 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	SFG1	Q12507	346 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	NCB2	Q92317	146 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	YOR093C	Q12275	1648 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	TUS1	Q06412	1307 aa		4.63	□□□□□ -1.67
CNL1	YDR357C	TDH2	P00358	332 aa	Known RBP	4.62	□□□□□ -1.67
CNL1	YDR357C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
CNL1	YDR357C	TRP3	P00937	484 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	PMA1	P05030	918 aa	Known RBP	4.62	□□□□□ -1.67
CNL1	YDR357C	GPH1	P06738	902 aa	Known RBP	4.62	□□□□□ -1.67
CNL1	YDR357C	CDC21	P06785	304 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	SNF5	P18480	905 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	URA4	P20051	364 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	ZRC1	P20107	442 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	YCP4	P25349	247 aa	Known RBP	4.62	□□□□□ -1.67
CNL1	YDR357C	ZTA1	P38230	334 aa	Known RBP	4.62	□□□□□ -1.67
CNL1	YDR357C	VMA22	P38784	181 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	FAD1	P38913	306 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	ATM1	P40416	690 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	YIL001W	P40560	513 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	DSN1	P40568	576 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	HIT1	P46973	164 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	IBA57	P47158	497 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	RIB4	P50861	169 aa	Predicted RBP	4.62	□□□□□ -1.67
CNL1	YDR357C	MTC3	P53077	123 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	MRS2	Q01926	470 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	PRM15	Q03262	622 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	WAR1	Q03631	944 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	ENT5	Q03769	411 aa	Known RBP	4.62	□□□□□ -1.67
CNL1	YDR357C	CTS2	Q06350	511 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	SEY1	Q99287	776 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	RAD9	P14737	1309 aa		4.62	□□□□□ -1.67
CNL1	YDR357C	ARD1	P07347	238 aa	Predicted RBP	4.61	□□□□□ -1.67
CNL1	YDR357C	FRS1	P15624	595 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms