RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C ARP4P80428 489 aa4.39□□□□□ -1.71
PRP28YDR243C RSC9Q03124 581 aa4.39□□□□□ -1.71
PRP28YDR243C CSN9Q03981 162 aa4.39□□□□□ -1.71
PRP28YDR243C VID22Q05934 901 aa4.39□□□□□ -1.71
PRP28YDR243C YLR345WQ06137 509 aa4.39□□□□□ -1.71
PRP28YDR243C BOP2Q06150 570 aa4.39□□□□□ -1.71
PRP28YDR243C YLR173WQ06247 608 aa4.39□□□□□ -1.71
PRP28YDR243C BCP1Q06338 283 aa4.39□□□□□ -1.71
PRP28YDR243C THI73Q07904 523 aa4.39□□□□□ -1.71
PRP28YDR243C CUE5Q08412 411 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C DIA2Q08496 732 aaPredicted RBP4.39□□□□□ -1.71
PRP28YDR243C SYC1Q08553 188 aaPredicted RBP4.39□□□□□ -1.71
PRP28YDR243C GRX6Q12438 231 aa4.39□□□□□ -1.71
PRP28YDR243C FAS2P19097 1887 aaKnown RBP4.39□□□□□ -1.71
PRP28YDR243C YOR093CQ12275 1648 aa4.38□□□□□ -1.71
PRP28YDR243C PUT2P07275 575 aa4.38□□□□□ -1.71
PRP28YDR243C ARO3P14843 370 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C FRS1P15624 595 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C CBF1P17106 351 aa4.38□□□□□ -1.71
PRP28YDR243C UTR1P21373 530 aa4.38□□□□□ -1.71
PRP28YDR243C SLY1P22213 666 aa4.38□□□□□ -1.71
PRP28YDR243C VPS34P22543 875 aa4.38□□□□□ -1.71
PRP28YDR243C RPI1P23250 407 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C CPR4P25334 318 aa4.38□□□□□ -1.71
PRP28YDR243C RSA4P25382 515 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C DGR2P32330 852 aa4.38□□□□□ -1.71
PRP28YDR243C PHA2P32452 334 aa4.38□□□□□ -1.71
PRP28YDR243C DAL3P32459 195 aa4.38□□□□□ -1.71
PRP28YDR243C DPH2P32461 534 aa4.38□□□□□ -1.71
PRP28YDR243C PRP40P33203 583 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C SEF1P34228 1148 aa4.38□□□□□ -1.71
PRP28YDR243C DHR2P36009 735 aaPredicted RBP4.38□□□□□ -1.71
PRP28YDR243C KAE1P36132 386 aa4.38□□□□□ -1.71
PRP28YDR243C MRPL3P36516 390 aa4.38□□□□□ -1.71
PRP28YDR243C ECM21P38167 1117 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C POA1P38218 177 aa4.38□□□□□ -1.71
PRP28YDR243C YBR137WP38276 179 aa4.38□□□□□ -1.71
PRP28YDR243C POP4P38336 279 aa4.38□□□□□ -1.71
PRP28YDR243C BZZ1P38822 633 aa4.38□□□□□ -1.71
PRP28YDR243C SET5P38890 526 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C RPN3P40016 523 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C UBP7P40453 1071 aa4.38□□□□□ -1.71
PRP28YDR243C PRK1P40494 810 aa4.38□□□□□ -1.71
PRP28YDR243C HXT9P40885 567 aa4.38□□□□□ -1.71
PRP28YDR243C CAF16P43569 289 aa4.38□□□□□ -1.71
PRP28YDR243C JHD2P47156 728 aaPredicted RBP4.38□□□□□ -1.71
PRP28YDR243C PAC10P48363 199 aa4.38□□□□□ -1.71
PRP28YDR243C NBP1P52919 319 aaPredicted RBP4.38□□□□□ -1.71
PRP28YDR243C CUE3P53137 624 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C ERV14P53173 138 aa4.38□□□□□ -1.71
PRP28YDR243C YGR012WP53206 393 aa4.38□□□□□ -1.71
PRP28YDR243C YCL001W-AP87012 153 aa4.38□□□□□ -1.71
PRP28YDR243C EEB1Q02891 456 aa4.38□□□□□ -1.71
PRP28YDR243C RNY1Q02933 434 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C TRM82Q03774 444 aa4.38□□□□□ -1.71
PRP28YDR243C SPC19Q03954 165 aa4.38□□□□□ -1.71
PRP28YDR243C DPB4Q04603 196 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C YOL019WQ08157 551 aa4.38□□□□□ -1.71
PRP28YDR243C ZEO1Q08245 113 aa4.38□□□□□ -1.71
PRP28YDR243C MCH5Q08777 521 aa4.38□□□□□ -1.71
PRP28YDR243C YPR202WQ08993 238 aa4.38□□□□□ -1.71
PRP28YDR243C AI5_BETAQ9ZZX0 354 aa4.38□□□□□ -1.71
PRP28YDR243C URB1P34241 1764 aaKnown RBP4.38□□□□□ -1.71
PRP28YDR243C RRT12P25381 491 aa4.37□□□□□ -1.71
PRP28YDR243C YIM1P28625 365 aa4.37□□□□□ -1.71
PRP28YDR243C VPS17P32913 551 aa4.37□□□□□ -1.71
PRP28YDR243C PTC1P35182 281 aa4.37□□□□□ -1.71
PRP28YDR243C PHO11P35842 467 aa4.37□□□□□ -1.71
PRP28YDR243C RMA1P36001 430 aaKnown RBP4.37□□□□□ -1.71
PRP28YDR243C AKL1P38080 1108 aaKnown RBP4.37□□□□□ -1.71
PRP28YDR243C APN2P38207 520 aa4.37□□□□□ -1.71
PRP28YDR243C CST26P38226 397 aa4.37□□□□□ -1.71
PRP28YDR243C PHO12P38693 467 aa4.37□□□□□ -1.71
PRP28YDR243C RRP3P38712 501 aaKnown RBP4.37□□□□□ -1.71
PRP28YDR243C STL1P39932 569 aa4.37□□□□□ -1.71
PRP28YDR243C RMD6P39975 231 aa4.37□□□□□ -1.71
PRP28YDR243C RGI1P40043 161 aaPredicted RBP4.37□□□□□ -1.71
PRP28YDR243C NUP82P40368 713 aa4.37□□□□□ -1.71
PRP28YDR243C HXT8P40886 569 aa4.37□□□□□ -1.71
PRP28YDR243C MAD2P40958 196 aa4.37□□□□□ -1.71
PRP28YDR243C ARF3P40994 183 aaRIP-Chip data4.37□□□□□ -1.71not detected
PRP28YDR243C LSB6P42951 607 aa4.37□□□□□ -1.71
PRP28YDR243C GNA1P43577 159 aaPredicted RBP4.37□□□□□ -1.71
PRP28YDR243C SPO74P45819 413 aa4.37□□□□□ -1.71
PRP28YDR243C AIP1P46680 615 aaKnown RBP4.37□□□□□ -1.71
PRP28YDR243C GUF1P46943 645 aa4.37□□□□□ -1.71
PRP28YDR243C YDL183CP48569 320 aa4.37□□□□□ -1.71
PRP28YDR243C CWC23P52868 283 aaPredicted RBP4.37□□□□□ -1.71
PRP28YDR243C TPN1P53099 579 aa4.37□□□□□ -1.71
PRP28YDR243C ART5P53244 586 aaKnown RBP4.37□□□□□ -1.71
PRP28YDR243C COG5P53951 403 aa4.37□□□□□ -1.71
PRP28YDR243C PEX13P80667 386 aa4.37□□□□□ -1.71
PRP28YDR243C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
PRP28YDR243C MTG1Q03151 367 aaPredicted RBP4.37□□□□□ -1.71
PRP28YDR243C OST6Q03723 332 aa4.37□□□□□ -1.71
PRP28YDR243C SND1Q04007 877 aa4.37□□□□□ -1.71
PRP28YDR243C BCH1Q05029 724 aa4.37□□□□□ -1.71
PRP28YDR243C DCR2Q05924 578 aa4.37□□□□□ -1.71
PRP28YDR243C HAL9Q12180 1030 aa4.37□□□□□ -1.71
PRP28YDR243C YOR342CQ12182 319 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms