RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	STB2	P46679	850 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	MDV1	P47025	714 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	YNL181W	P53878	407 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	TOF2	Q02208	771 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	YML122C	Q03207	126 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	RQC1	Q05468	723 aa	Known RBP	4.18	□□□□□ -1.74
TRM1	YDR120C	PEP4	P07267	405 aa	Known RBP	4.18	□□□□□ -1.74
TRM1	YDR120C	PMS1	P14242	873 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	SUI2	P20459	304 aa	Known RBP	4.18	□□□□□ -1.74
TRM1	YDR120C	GID7	P25569	745 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	PDR3	P33200	976 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	ASK1	P35734	292 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	YPT53	P36019	220 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	BYE1	P36106	594 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	SPC97	P38863	823 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	GPD2	P41911	440 aa	Known RBP	4.18	□□□□□ -1.74
TRM1	YDR120C	SNG1	P46950	547 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	AIM22	P47051	409 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	SMM1	P53720	384 aa	Known RBP	4.18	□□□□□ -1.74
TRM1	YDR120C	ESBP6	P53918	673 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	YMR160W	Q03823	816 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	YDL057W	Q07379	328 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	YDL007C-A	Q2V2Q0	85 aa		4.18	□□□□□ -1.74
TRM1	YDR120C	SNC1	P31109	117 aa		4.17	□□□□□ -1.74
TRM1	YDR120C	LAG1	P38703	411 aa		4.17	□□□□□ -1.74
TRM1	YDR120C	YIR016W	P40572	265 aa		4.17	□□□□□ -1.74
TRM1	YDR120C	IAH1	P41734	238 aa		4.17	□□□□□ -1.74
TRM1	YDR120C	DUG3	P53871	357 aa		4.17	□□□□□ -1.74
TRM1	YDR120C	YVH1	Q02256	364 aa	Known RBP	4.17	□□□□□ -1.74
TRM1	YDR120C	UBX3	Q12229	455 aa		4.17	□□□□□ -1.74
TRM1	YDR120C	YKL023W	P36103	277 aa	Known RBP	4.16	□□□□□ -1.74
TRM1	YDR120C	YHR210C	P38893	341 aa		4.16	□□□□□ -1.74
TRM1	YDR120C	RTS2	P40962	232 aa		4.16	□□□□□ -1.74
TRM1	YDR120C	HXT14	P42833	540 aa		4.16	□□□□□ -1.74
TRM1	YDR120C	ALK1	P43633	760 aa	Known RBP	4.16	□□□□□ -1.74
TRM1	YDR120C	DRN1	P53255	507 aa	Known RBP	4.16	□□□□□ -1.74
TRM1	YDR120C	PDS5	Q04264	1277 aa		4.16	□□□□□ -1.74
TRM1	YDR120C	YOR365C	Q08844	703 aa		4.16	□□□□□ -1.74
TRM1	YDR120C	PEP5	P12868	1029 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	PRP2	P20095	876 aa	Predicted RBP	4.15	□□□□□ -1.74
TRM1	YDR120C	SGV1	P23293	657 aa	Known RBP	4.15	□□□□□ -1.74
TRM1	YDR120C	RPS2	P25443	254 aa	Known RBP	4.15	□□□□□ -1.74
TRM1	YDR120C	SAS3	P34218	831 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	OTU2	P38747	307 aa	Known RBP	4.15	□□□□□ -1.74
TRM1	YDR120C	AXL1	P40851	1208 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	FET5	P43561	622 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	CAF130	P53280	1122 aa	Predicted RBP	4.15	□□□□□ -1.74
TRM1	YDR120C	SCW4	P53334	386 aa	Known RBP	4.15	□□□□□ -1.74
TRM1	YDR120C	YPL014W	Q02606	381 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	SHR3	Q02774	210 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	TAP42	Q04372	366 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	SSK1	Q07084	712 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	MLH2	Q07980	695 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	GEP3	Q08622	556 aa		4.15	□□□□□ -1.74
TRM1	YDR120C	YFL068W	P0CX99	160 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	YLL066W-A	P0CY00	160 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	YLL067W-A	P0CY01	160 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	CLB3	P24870	427 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	RPC53	P25441	422 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	PAP1	P29468	568 aa	Known RBP	4.15	□□□□□ -1.75
TRM1	YDR120C	MCM4	P30665	933 aa	Known RBP	4.15	□□□□□ -1.75
TRM1	YDR120C	SHP1	P34223	423 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	PHD1	P36093	366 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	YIL152W	P40455	235 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	BUD32	P53323	261 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	RHO4	Q00246	291 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	BET4	Q00618	327 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	ERP4	Q12450	207 aa		4.15	□□□□□ -1.75
TRM1	YDR120C	AUS1	Q08409	1394 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	RPL31B	P0C2H9	113 aa	Known RBP	4.14	□□□□□ -1.75
TRM1	YDR120C	BUD14	P27637	709 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	HSP104	P31539	908 aa	Known RBP	4.14	□□□□□ -1.75
TRM1	YDR120C	PFF1	P38244	976 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	ERG7	P38604	731 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	YJR154W	P47181	346 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	RPA49	Q01080	415 aa	Predicted RBP	4.14	□□□□□ -1.75
TRM1	YDR120C	RSF1	Q05043	376 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	RBS1	Q05672	457 aa	Known RBP	4.14	□□□□□ -1.75
TRM1	YDR120C	DIC1	Q06143	298 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	THP1	Q08231	455 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	BSC1	Q12140	328 aa		4.14	□□□□□ -1.75
TRM1	YDR120C	MLP1	Q02455	1875 aa	Known RBP	4.14	□□□□□ -1.75
TRM1	YDR120C	RAD52	P06778	471 aa	Known RBP	4.13	□□□□□ -1.75
TRM1	YDR120C	PDX1	P16451	410 aa		4.13	□□□□□ -1.75
TRM1	YDR120C	MGR1	P25573	417 aa		4.13	□□□□□ -1.75
TRM1	YDR120C	SMY1	P32364	656 aa	Known RBP	4.13	□□□□□ -1.75
TRM1	YDR120C	SPC34	P36131	295 aa		4.13	□□□□□ -1.75
TRM1	YDR120C	EFM2	P38347	419 aa		4.13	□□□□□ -1.75
TRM1	YDR120C	TIF4631	P39935	952 aa	Known RBP	4.13	□□□□□ -1.75
TRM1	YDR120C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
TRM1	YDR120C	HEF3	P53978	1044 aa	Known RBP	4.13	□□□□□ -1.75
TRM1	YDR120C	RMT2	Q03305	412 aa		4.13	□□□□□ -1.75
TRM1	YDR120C	YMR254C	Q04838	102 aa		4.13	□□□□□ -1.75
TRM1	YDR120C	DSE3	Q08729	430 aa		4.13	□□□□□ -1.75
TRM1	YDR120C	COR1	P07256	457 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	LPD1	P09624	499 aa	Known RBP	4.12	□□□□□ -1.75
TRM1	YDR120C	TCM62	P38228	572 aa	Known RBP	4.12	□□□□□ -1.75
TRM1	YDR120C	MBB1	P39534	108 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	ATG27	P46989	271 aa		4.12	□□□□□ -1.75
TRM1	YDR120C	SLG1	P54867	378 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms