RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W MGR1P25573 417 aa5.43□□□□□ -1.54
FOB1YDR110W MRT4P33201 236 aaKnown RBP5.43□□□□□ -1.54
FOB1YDR110W CSE1P33307 960 aa5.43□□□□□ -1.54
FOB1YDR110W AUR1P36107 401 aaPredicted RBP5.43□□□□□ -1.54
FOB1YDR110W KTR3P38130 404 aaPredicted RBP5.43□□□□□ -1.54
FOB1YDR110W CDS1P38221 457 aa5.43□□□□□ -1.54
FOB1YDR110W SWC5P38326 303 aa5.43□□□□□ -1.54
FOB1YDR110W FMO1P38866 432 aa5.43□□□□□ -1.54
FOB1YDR110W RFC4P40339 323 aaKnown RBP5.43□□□□□ -1.54
FOB1YDR110W FKH2P41813 862 aa5.43□□□□□ -1.54
FOB1YDR110W YGL114WP53134 725 aa5.43□□□□□ -1.54
FOB1YDR110W YGR066CP53242 292 aa5.43□□□□□ -1.54
FOB1YDR110W PXR1P53335 271 aaPredicted RBP5.43□□□□□ -1.54
FOB1YDR110W RRN9P53437 365 aa5.43□□□□□ -1.54
FOB1YDR110W SSU72P53538 206 aaPredicted RBP5.43□□□□□ -1.54
FOB1YDR110W YNL181WP53878 407 aa5.43□□□□□ -1.54
FOB1YDR110W VAC7P53950 1165 aa5.43□□□□□ -1.54
FOB1YDR110W HMO1Q03973 246 aaKnown RBP5.43□□□□□ -1.54
FOB1YDR110W MYO5Q04439 1219 aaKnown RBP5.43□□□□□ -1.54
FOB1YDR110W CRD1Q07560 283 aa5.43□□□□□ -1.54
FOB1YDR110W SDO1Q07953 250 aaKnown RBP5.43□□□□□ -1.54
FOB1YDR110W HRK1Q08732 759 aaKnown RBP5.43□□□□□ -1.54
FOB1YDR110W MSH5Q12175 901 aa5.43□□□□□ -1.54
FOB1YDR110W GLO4Q12320 285 aa5.43□□□□□ -1.54
FOB1YDR110W DIF1O13577 133 aa5.42□□□□□ -1.54
FOB1YDR110W SOD2P00447 233 aa5.42□□□□□ -1.54
FOB1YDR110W MATALPHA2P0CY08 210 aa5.42□□□□□ -1.54
FOB1YDR110W HMLALPHA2P0CY09 210 aa5.42□□□□□ -1.54
FOB1YDR110W ISY1P21374 235 aaPredicted RBP5.42□□□□□ -1.54
FOB1YDR110W ADH7P25377 361 aa5.42□□□□□ -1.54
FOB1YDR110W PBN1P25580 416 aa5.42□□□□□ -1.54
FOB1YDR110W SEC61P32915 480 aa5.42□□□□□ -1.54
FOB1YDR110W CMC1P36064 111 aa5.42□□□□□ -1.54
FOB1YDR110W AGP2P38090 596 aa5.42□□□□□ -1.54
FOB1YDR110W END3P39013 349 aa5.42□□□□□ -1.54
FOB1YDR110W PHB1P40961 287 aa5.42□□□□□ -1.54
FOB1YDR110W GAB1P41733 394 aa5.42□□□□□ -1.54
FOB1YDR110W MAF1P41910 395 aa5.42□□□□□ -1.54
FOB1YDR110W YJL171CP46992 396 aa5.42□□□□□ -1.54
FOB1YDR110W ZPR1P53303 486 aaKnown RBP5.42□□□□□ -1.54
FOB1YDR110W MRP51Q02950 344 aa5.42□□□□□ -1.54
FOB1YDR110W RRG8Q06109 277 aa5.42□□□□□ -1.54
FOB1YDR110W PIG1Q06216 648 aa5.42□□□□□ -1.54
FOB1YDR110W YPL272CQ08984 517 aa5.42□□□□□ -1.54
FOB1YDR110W LYS21Q12122 440 aaKnown RBP5.42□□□□□ -1.54
FOB1YDR110W YOR012WQ12351 137 aa5.42□□□□□ -1.54
FOB1YDR110W GPR1Q12361 961 aa5.42□□□□□ -1.54
FOB1YDR110W WHI2P12611 486 aa5.41□□□□□ -1.54
FOB1YDR110W POL30P15873 258 aaKnown RBP5.41□□□□□ -1.54
FOB1YDR110W ARG1P22768 420 aa5.41□□□□□ -1.54
FOB1YDR110W PEX1P24004 1043 aa5.41□□□□□ -1.54
FOB1YDR110W GCG1P32656 232 aaKnown RBP5.41□□□□□ -1.54
FOB1YDR110W TUL1P36096 758 aa5.41□□□□□ -1.54
FOB1YDR110W DBP7P36120 742 aaKnown RBP5.41□□□□□ -1.54
FOB1YDR110W AIM29P36154 155 aa5.41□□□□□ -1.54
FOB1YDR110W RFT1P38206 574 aaPredicted RBP5.41□□□□□ -1.54
FOB1YDR110W SEC72P39742 193 aaKnown RBP5.41□□□□□ -1.54
FOB1YDR110W YER137CP40083 148 aaKnown RBP5.41□□□□□ -1.54
FOB1YDR110W HIT1P46973 164 aa5.41□□□□□ -1.54
FOB1YDR110W YJL132WP47014 750 aa5.41□□□□□ -1.54
FOB1YDR110W LSM1P47017 172 aaKnown RBP5.41□□□□□ -1.54
FOB1YDR110W YJL118WP47022 219 aa5.41□□□□□ -1.54
FOB1YDR110W INP52P50942 1183 aa5.41□□□□□ -1.54
FOB1YDR110W YKE2P52553 114 aa5.41□□□□□ -1.54
FOB1YDR110W IRC4Q03036 179 aa5.41□□□□□ -1.54
FOB1YDR110W YML037CQ03703 340 aa5.41□□□□□ -1.54
FOB1YDR110W PDS5Q04264 1277 aa5.41□□□□□ -1.54
FOB1YDR110W YDR222WQ04925 415 aa5.41□□□□□ -1.54
FOB1YDR110W STP4Q07351 490 aa5.41□□□□□ -1.54
FOB1YDR110W BUD20Q08004 166 aaPredicted RBP5.41□□□□□ -1.54
FOB1YDR110W NOP12Q08208 459 aaKnown RBP5.41□□□□□ -1.54
FOB1YDR110W TMA16Q08687 178 aa5.41□□□□□ -1.54
FOB1YDR110W UPC2Q12151 913 aa5.41□□□□□ -1.54
FOB1YDR110W GAL80P04387 435 aa5.4□□□□□ -1.54
FOB1YDR110W MOD5P07884 428 aa5.4□□□□□ -1.54
FOB1YDR110W KRS1P15180 591 aaKnown RBP5.4□□□□□ -1.54
FOB1YDR110W ZRC1P20107 442 aa5.4□□□□□ -1.54
FOB1YDR110W DAL2P25335 343 aa5.4□□□□□ -1.54
FOB1YDR110W YKL071WP36086 256 aa5.4□□□□□ -1.54
FOB1YDR110W FAD1P38913 306 aa5.4□□□□□ -1.54
FOB1YDR110W FHL1P39521 936 aa5.4□□□□□ -1.54
FOB1YDR110W YEL020CP39994 560 aa5.4□□□□□ -1.54
FOB1YDR110W YER156CP40093 338 aaKnown RBP5.4□□□□□ -1.54
FOB1YDR110W BIT61P47041 543 aa5.4□□□□□ -1.54
FOB1YDR110W SKI8Q02793 397 aaPredicted RBP5.4□□□□□ -1.54
FOB1YDR110W YDC1Q02896 317 aa5.4□□□□□ -1.54
FOB1YDR110W ACL4Q03771 387 aa5.4□□□□□ -1.54
FOB1YDR110W GCN2P15442 1659 aa5.4□□□□□ -1.54
FOB1YDR110W PDR11P40550 1411 aa5.4□□□□□ -1.55
FOB1YDR110W ATP2P00830 511 aaKnown RBP5.4□□□□□ -1.55
FOB1YDR110W PAB1P04147 577 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
FOB1YDR110W CDC33P07260 213 aaKnown RBP5.4□□□□□ -1.55
FOB1YDR110W VPS33P20795 691 aa5.4□□□□□ -1.55
FOB1YDR110W VPS1P21576 704 aaKnown RBP5.4□□□□□ -1.55
FOB1YDR110W ZUO1P32527 433 aaKnown RBP5.4□□□□□ -1.55
FOB1YDR110W VPS51P36116 164 aa5.4□□□□□ -1.55
FOB1YDR110W YKR075CP36155 307 aa5.4□□□□□ -1.55
FOB1YDR110W IML3P38265 245 aa5.4□□□□□ -1.55
FOB1YDR110W TOS1P38288 455 aa5.4□□□□□ -1.55
FOB1YDR110W SOP4P39543 234 aaPredicted RBP5.4□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms