RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	TY1A-LR2	P0CX72	440 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-PL	P0CX73	440 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-JR1	P0CX74	440 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-LR3	P0CX75	440 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-ML2	P0CX76	440 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	MRP1	P10662	321 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	ZWF1	P11412	505 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	MAS2	P11914	482 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	RPL24B	P24000	155 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	BEM1	P29366	551 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	NDI1	P32340	513 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	COQ2	P32378	372 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	VPH1	P32563	840 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	SIP1	P32578	815 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	SPO23	P33757	523 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	SER2	P42941	309 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	GET1	P53192	235 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	YNR062C	P53748	327 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	INN1	P53901	409 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	HDA1	P53973	706 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	YDR286C	Q05530	114 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	RTT103	Q05543	409 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	VID22	Q05934	901 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	VPS74	Q06385	345 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	YOR283W	Q12040	230 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-GR1	Q12085	440 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	HAT1	Q12341	374 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-OL	Q92392	440 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	PMA1	P05030	918 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	FBP1	P09201	348 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	MET8	P15807	274 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	DAL1	P32375	460 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	APE2	P32454	952 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	UGA4	P32837	571 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	WHI3	P34761	661 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	SRP102	P36057	244 aa	Predicted RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	MSC7	P38694	644 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	PTC7	P38797	343 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	CRG1	P38892	291 aa	RIP-Chip data	5.11	□□□□□ -1.59	not detected
DBF4	YDR052C	GTO1	P48239	356 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	PAC10	P48363	199 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	LYS20	P48570	428 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	ERV14	P53173	138 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	ADI1	Q03677	179 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	YDR131C	Q03899	556 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	MSC6	Q08818	692 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	SCP1	Q08873	200 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TYW1	Q08960	810 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	YGL194C-A	Q2V2P6	80 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	STE2	D6VTK4	431 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	RPP2B	P02400	110 aa	Known RBP	5.1	□□□□□ -1.59
DBF4	YDR052C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
DBF4	YDR052C	WHI2	P12611	486 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	MGT1	P26188	188 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	PHA2	P32452	334 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	ATP11	P32453	318 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	DAL3	P32459	195 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	PTC1	P35182	281 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	YKL069W	P36088	180 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	CTP1	P38152	299 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	MAL32	P38158	584 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	SSH1	P38353	490 aa	Known RBP	5.1	□□□□□ -1.59
DBF4	YDR052C	HSE1	P38753	452 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	BIG1	P38813	335 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	PRM9	P39551	298 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	UBP5	P39944	805 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	RMD6	P39975	231 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	JHD2	P47156	728 aa	Predicted RBP	5.1	□□□□□ -1.59
DBF4	YDR052C	NBP1	P52919	319 aa	Predicted RBP	5.1	□□□□□ -1.59
DBF4	YDR052C	SLD3	P53135	668 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	LSB1	P53281	241 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	MAL12	P53341	584 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
DBF4	YDR052C	TPP1	Q03796	238 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	APC4	Q04601	652 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	THI73	Q07904	523 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	NBA1	Q08229	501 aa	Known RBP	5.1	□□□□□ -1.59
DBF4	YDR052C	AAD15	Q08361	143 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	YOR114W	Q12219	294 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	YLR422W	Q06409	1932 aa		5.1	□□□□□ -1.59
DBF4	YDR052C	YRF1-1	P0CX20	1796 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	YRF1-5	P0CX21	1796 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	YRF1-8	P0CX22	1796 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	INO1	P11986	533 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	ENA1	P13587	1091 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	FBA1	P14540	359 aa	Known RBP	5.09	□□□□□ -1.59
DBF4	YDR052C	UGA1	P17649	471 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	YUR1	P26725	428 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	FUN30	P31380	1131 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	MTC2	P34246	357 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	APT2	P36973	181 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	AIM18	P38884	321 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	IPL1	P38991	367 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	FHL1	P39521	936 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	LOC1	P43586	204 aa	Predicted RBP	5.09	□□□□□ -1.59
DBF4	YDR052C	TOS3	P43637	560 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	FAR3	P46671	204 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	YJR056C	P47115	236 aa		5.09	□□□□□ -1.59
DBF4	YDR052C	PTK2	P47116	818 aa	Known RBP	5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms