RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF3	YDL194W	URA4	P20051	364 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	PER1	P25625	357 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	ITR2	P30606	609 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	TUL1	P36096	758 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	SRL3	P36167	246 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	DUG2	P38149	878 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	YBL029W	P38201	376 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	GIP1	P38229	639 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	CYC2	P38909	366 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	COS4	P43542	379 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	YJL163C	P46996	555 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	YIP3	P53633	176 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	CWC25	P53854	179 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	RIM13	Q03792	727 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	GIS1	Q03833	894 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	MYO5	Q04439	1219 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	RRG8	Q06109	277 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	DXO1	Q06349	442 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	ECM30	Q06673	1274 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	RAX1	Q08760	435 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	AI5_BETA	Q9ZZX0	354 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	COS2	P0CX12	379 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	COS3	P0CX13	379 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	HPR1	P17629	752 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	SYN8	P31377	255 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	FUN26	P31381	517 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	PRP21	P32524	280 aa	Predicted RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	SPR1	P32603	445 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	RAD5	P32849	1169 aa	Predicted RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	IXR1	P33417	597 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	CLG1	P35190	452 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	SNU114	P36048	1008 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	MRPL7	P36519	292 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	AAP1	P37898	856 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	LDH1	P38139	375 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	SRP68	P38687	599 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	FET3	P38993	636 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	CCT2	P39076	527 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	UBP9	P39967	754 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	VID28	P40547	921 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	MTD1	Q02046	320 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	HAP5	Q02516	242 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	APC4	Q04601	652 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	WHI4	Q07655	649 aa	Known RBP	4.88	□□□□□ -1.63
SNF3	YDL194W	SFM1	Q12314	213 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	SEY1	Q99287	776 aa		4.88	□□□□□ -1.63
SNF3	YDL194W	ILV5	P06168	395 aa	Known RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	DST1	P07273	309 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	SWI5	P08153	709 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	CKI1	P20485	582 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	LIP5	P32875	414 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	ELF1	P36053	145 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	YBR259W	P38338	688 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	GLO1	P50107	326 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	RIB4	P50861	169 aa	Predicted RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	NBP35	P52920	328 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	DBP6	P53734	629 aa	Known RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	YAT1	P80235	687 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	MSC2	Q03455	724 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	HED1	Q03937	162 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	BCH1	Q05029	724 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	DIS3	Q08162	1001 aa	Known RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	WSC3	Q12215	556 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	SVS1	Q12254	260 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	RPO41	P13433	1351 aa	Known RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	SPE1	P08432	466 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	TUB1	P09733	447 aa	Known RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	PEP5	P12868	1029 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	CPR4	P25334	318 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	SEC65	P29478	273 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	CAM1	P29547	415 aa	Known RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	PDB1	P32473	366 aa	Known RBP	4.87	□□□□□ -1.63
SNF3	YDL194W	YEL020C	P39994	560 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	YAR1	P46683	200 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	YJR124C	P47159	448 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	IMA1	P53051	589 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	VOA1	P53262	265 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	NMA111	P53920	997 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	SKO1	Q02100	647 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	FAR8	Q05040	523 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	TRE1	Q08919	783 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	YPR022C	Q12139	1133 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	EMP46	Q12396	444 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	Q0144	Q9ZZW2	109 aa		4.87	□□□□□ -1.63
SNF3	YDL194W	CBP6	P07253	162 aa	Predicted RBP	4.86	□□□□□ -1.63
SNF3	YDL194W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SNF3	YDL194W	RPL4A	P10664	362 aa	Known RBP	4.86	□□□□□ -1.63
SNF3	YDL194W	GAL3	P13045	520 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	SNA3	P14359	133 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	SWI4	P25302	1093 aa	Known RBP	4.86	□□□□□ -1.63
SNF3	YDL194W	VMA3	P25515	160 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	SET5	P38890	526 aa	Known RBP	4.86	□□□□□ -1.63
SNF3	YDL194W	BDH2	P39713	417 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	RPH1	P39956	796 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	YAT2	P40017	923 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	POG1	P40473	351 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	HXT14	P42833	540 aa		4.86	□□□□□ -1.63
SNF3	YDL194W	YJR141W	P47172	347 aa	Predicted RBP	4.86	□□□□□ -1.63
SNF3	YDL194W	RPL4B	P49626	362 aa	Known RBP	4.86	□□□□□ -1.63
SNF3	YDL194W	SHY1	P53266	389 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms