RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	TUL1	P36096	758 aa		4.14	□□□□□ -1.75
RPN6	YDL097C	RPF2	P36160	344 aa	Known RBP	4.14	□□□□□ -1.75
RPN6	YDL097C	SIT1	P39980	628 aa		4.14	□□□□□ -1.75
RPN6	YDL097C	SLZ1	P40167	298 aa		4.14	□□□□□ -1.75
RPN6	YDL097C	ERG13	P54839	491 aa	Known RBP	4.14	□□□□□ -1.75
RPN6	YDL097C	YDR132C	Q03900	495 aa		4.14	□□□□□ -1.75
RPN6	YDL097C	NBA1	Q08229	501 aa	Known RBP	4.14	□□□□□ -1.75
RPN6	YDL097C	YOR114W	Q12219	294 aa		4.14	□□□□□ -1.75
RPN6	YDL097C	BI2	P03873	423 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	RPL11A	P0C0W9	174 aa	Known RBP	4.13	□□□□□ -1.75
RPN6	YDL097C	YCL049C	P25577	312 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	SRP101	P32916	621 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	LRG1	P35688	1017 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	YGP1	P38616	354 aa	Known RBP	4.13	□□□□□ -1.75
RPN6	YDL097C	ELO3	P40319	345 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	ECO1	P43605	281 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	YJR039W	P47107	1121 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	YGR237C	P50089	785 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	YGR127W	P53275	312 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	ATG21	Q02887	496 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	COG4	Q06096	861 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	GRS2	Q06817	618 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	YOR223W	Q12015	292 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	MRH1	Q12117	320 aa	Predicted RBP	4.13	□□□□□ -1.75
RPN6	YDL097C	YPL150W	Q12152	901 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	PFK27	Q12471	397 aa	Predicted RBP	4.13	□□□□□ -1.75
RPN6	YDL097C	RPL11B	Q3E757	174 aa	Predicted RBP	4.13	□□□□□ -1.75
RPN6	YDL097C	BI3	Q9ZZW7	517 aa		4.13	□□□□□ -1.75
RPN6	YDL097C	ADE8	P04161	214 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	FUM1	P08417	488 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	RPL19A	P0CX82	189 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	RPL19B	P0CX83	189 aa	Predicted RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	CLN1	P20437	546 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	YSP3	P25036	478 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	CHA1	P25379	360 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	MRPL9	P31334	269 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	HIR2	P32480	875 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	SKT5	P34226	696 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	MAL33	P38157	468 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	YHR045W	P38775	560 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	RGI2	P40188	164 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	YMR144W	P40214	342 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	PFA3	P42836	336 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	SPT20	P50875	604 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	YPR003C	P53394	754 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	TEX1	P53851	422 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	PDR16	P53860	351 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	ASI1	P54074	624 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	VPS9	P54787	451 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	SXM1	Q04175	944 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	VTA1	Q06263	330 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	CUE5	Q08412	411 aa	Known RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	TMC1	Q08422	150 aa	Predicted RBP	4.12	□□□□□ -1.75
RPN6	YDL097C	YOR032W-A	Q8TGS1	66 aa		4.12	□□□□□ -1.75
RPN6	YDL097C	STE12	P13574	688 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	GFA1	P14742	717 aa	Known RBP	4.11	□□□□□ -1.75
RPN6	YDL097C	SLY1	P22213	666 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	YCR015C	P25616	317 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	ERG9	P29704	444 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	CDC12	P32468	407 aa	Known RBP	4.11	□□□□□ -1.75
RPN6	YDL097C	MGM101	P32787	269 aa	Known RBP	4.11	□□□□□ -1.75
RPN6	YDL097C	PRS1	P32895	427 aa	Known RBP	4.11	□□□□□ -1.75
RPN6	YDL097C	CTF13	P35203	478 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	NNK1	P36003	928 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	DHR2	P36009	735 aa	Predicted RBP	4.11	□□□□□ -1.75
RPN6	YDL097C	SWC5	P38326	303 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	VPS52	P39904	641 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	HOC1	P47124	396 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	COS12	P53053	380 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	PRP38	Q00723	242 aa	Predicted RBP	4.11	□□□□□ -1.75
RPN6	YDL097C	UME1	Q03010	460 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	OPY2	Q06810	360 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	YLR001C	Q07895	862 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	HRK1	Q08732	759 aa	Known RBP	4.11	□□□□□ -1.75
RPN6	YDL097C	GTT2	Q12390	233 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	TMA17	Q12513	150 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	SPO24	Q3E752	67 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	YLR149C	Q99296	730 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	IZH4	Q99393	312 aa		4.11	□□□□□ -1.75
RPN6	YDL097C	HXT3	P32466	567 aa	Known RBP	4.1	□□□□□ -1.75
RPN6	YDL097C	OTU2	P38747	307 aa	Known RBP	4.1	□□□□□ -1.75
RPN6	YDL097C	TDA3	P38758	523 aa		4.1	□□□□□ -1.75
RPN6	YDL097C	AIM18	P38884	321 aa		4.1	□□□□□ -1.75
RPN6	YDL097C	SEC26	P41810	973 aa	Known RBP	4.1	□□□□□ -1.75
RPN6	YDL097C	TOM22	P49334	152 aa		4.1	□□□□□ -1.75
RPN6	YDL097C	YGR250C	P53316	781 aa	Known RBP	4.1	□□□□□ -1.75
RPN6	YDL097C	GAS2	Q06135	555 aa		4.1	□□□□□ -1.75
RPN6	YDL097C	YOL159C	Q08300	171 aa		4.1	□□□□□ -1.75
RPN6	YDL097C	ACM1	Q08981	209 aa		4.1	□□□□□ -1.75
RPN6	YDL097C	KIN2	P13186	1147 aa	Known RBP	4.09	□□□□□ -1.75
RPN6	YDL097C	EST1	P17214	699 aa	Predicted RBP	4.09	□□□□□ -1.75
RPN6	YDL097C	APL1	P27351	700 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	ATP11	P32453	318 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	SAC6	P32599	642 aa	Known RBP	4.09	□□□□□ -1.75
RPN6	YDL097C	AFR1	P33304	620 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	SPC29	P33419	253 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	IME4	P41833	600 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	CIR1	P42940	261 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	OSH6	Q02201	448 aa		4.09	□□□□□ -1.75
RPN6	YDL097C	PLB2	Q03674	706 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms