RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C UTR4P32626 227 aa3.86□□□□□ -1.79
RPN4YDL020C TMT1P32643 299 aa3.86□□□□□ -1.79
RPN4YDL020C TRS65P32893 560 aa3.86□□□□□ -1.79
RPN4YDL020C GCS1P35197 352 aa3.86□□□□□ -1.79
RPN4YDL020C OSH3P38713 996 aaKnown RBP3.86□□□□□ -1.79
RPN4YDL020C YMR147WP40218 223 aaKnown RBP3.86□□□□□ -1.79
RPN4YDL020C YJL068CP40363 299 aa3.86□□□□□ -1.79
RPN4YDL020C SCD6P45978 349 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79 RIP-Chip
RPN4YDL020C BNI5P53890 448 aaKnown RBP3.86□□□□□ -1.79
RPN4YDL020C SEC5P89102 971 aa3.86□□□□□ -1.79
RPN4YDL020C RMT2Q03305 412 aa3.86□□□□□ -1.79
RPN4YDL020C SLD5Q03406 294 aa3.86□□□□□ -1.79
RPN4YDL020C YMR087WQ04299 284 aa3.86□□□□□ -1.79
RPN4YDL020C IVY1Q04934 453 aa3.86□□□□□ -1.79
RPN4YDL020C PHO92Q06390 306 aa3.86□□□□□ -1.79
RPN4YDL020C YEH2Q07950 538 aa3.86□□□□□ -1.79
RPN4YDL020C ICT1Q12385 394 aa3.86□□□□□ -1.79
RPN4YDL020C YCR007CP25354 239 aa3.85□□□□□ -1.79
RPN4YDL020C IDH2P28241 369 aaKnown RBP3.85□□□□□ -1.79
RPN4YDL020C YIM1P28625 365 aa3.85□□□□□ -1.79
RPN4YDL020C ATP11P32453 318 aa3.85□□□□□ -1.79
RPN4YDL020C RML2P32611 393 aa3.85□□□□□ -1.79
RPN4YDL020C YNK1P36010 153 aaKnown RBP3.85□□□□□ -1.79
RPN4YDL020C YND1P40009 630 aa3.85□□□□□ -1.79
RPN4YDL020C YTA12P40341 825 aa3.85□□□□□ -1.79
RPN4YDL020C POP1P41812 875 aa3.85□□□□□ -1.79
RPN4YDL020C ERB1Q04660 807 aaKnown RBP3.85□□□□□ -1.79
RPN4YDL020C ROY1Q04847 553 aa3.85□□□□□ -1.79
RPN4YDL020C ISA2Q12425 185 aa3.85□□□□□ -1.79
RPN4YDL020C ISN1Q99312 450 aa3.85□□□□□ -1.79
RPN4YDL020C SRP72P38688 640 aaKnown RBP3.85□□□□□ -1.79
RPN4YDL020C SYG1P40528 902 aa3.85□□□□□ -1.79
RPN4YDL020C CUL3P53202 744 aa3.85□□□□□ -1.79
RPN4YDL020C GPI1P53306 609 aa3.85□□□□□ -1.79
RPN4YDL020C YLR345WQ06137 509 aa3.85□□□□□ -1.79
RPN4YDL020C SIL1Q08199 421 aa3.85□□□□□ -1.79
RPN4YDL020C NRT1Q08485 598 aa3.85□□□□□ -1.79
RPN4YDL020C CFT2Q12102 859 aaPredicted RBP3.85□□□□□ -1.79
RPN4YDL020C SMC6Q12749 1114 aa3.85□□□□□ -1.79
RPN4YDL020C GLK1P17709 500 aaKnown RBP3.84□□□□□ -1.8
RPN4YDL020C PPZ1P26570 692 aa3.84□□□□□ -1.8
RPN4YDL020C PXA2P34230 853 aa3.84□□□□□ -1.8
RPN4YDL020C THI2P38141 450 aa3.84□□□□□ -1.8
RPN4YDL020C BZZ1P38822 633 aa3.84□□□□□ -1.8
RPN4YDL020C VPS52P39904 641 aa3.84□□□□□ -1.8
RPN4YDL020C KAP120Q02932 1032 aa3.84□□□□□ -1.8
RPN4YDL020C BNA5Q05979 453 aa3.84□□□□□ -1.8
RPN4YDL020C YAP7Q08182 245 aa3.84□□□□□ -1.8
RPN4YDL020C AFI1Q99222 893 aa3.84□□□□□ -1.8
RPN4YDL020C HOM3P10869 527 aa3.83□□□□□ -1.8
RPN4YDL020C ATP10P18496 279 aa3.83□□□□□ -1.8
RPN4YDL020C CLB1P24868 471 aa3.83□□□□□ -1.8
RPN4YDL020C SNT1P25357 1226 aa3.83□□□□□ -1.8
RPN4YDL020C FUN19P28003 413 aaPredicted RBP3.83□□□□□ -1.8
RPN4YDL020C FRE1P32791 686 aa3.83□□□□□ -1.8
RPN4YDL020C YME2P32843 850 aa3.83□□□□□ -1.8
RPN4YDL020C SAD1P43589 448 aa3.83□□□□□ -1.8
RPN4YDL020C URB2P47108 1174 aa3.83□□□□□ -1.8
RPN4YDL020C FMS1P50264 508 aa3.83□□□□□ -1.8
RPN4YDL020C RMD9P53140 646 aaKnown RBP3.83□□□□□ -1.8
RPN4YDL020C RSC1P53236 928 aa3.83□□□□□ -1.8
RPN4YDL020C LSC1P53598 329 aaKnown RBP3.83□□□□□ -1.8
RPN4YDL020C NUP53Q03790 475 aa3.83□□□□□ -1.8
RPN4YDL020C RRP45Q05636 305 aaKnown RBP3.83□□□□□ -1.8
RPN4YDL020C KEL3Q08979 651 aaPredicted RBP3.83□□□□□ -1.8
RPN4YDL020C RRD2Q12461 358 aa3.83□□□□□ -1.8
RPN4YDL020C AMD1P15274 810 aaKnown RBP3.82□□□□□ -1.8
RPN4YDL020C URA7P28274 579 aaKnown RBP3.82□□□□□ -1.8
RPN4YDL020C RIM2P38127 377 aa3.82□□□□□ -1.8
RPN4YDL020C DIM1P41819 318 aaKnown RBP3.82□□□□□ -1.8
RPN4YDL020C YML6P51998 286 aa3.82□□□□□ -1.8
RPN4YDL020C KTR5P53966 522 aaPredicted RBP3.82□□□□□ -1.8
RPN4YDL020C SOV1Q04748 898 aa3.82□□□□□ -1.8
RPN4YDL020C DON1Q05610 365 aa3.82□□□□□ -1.8
RPN4YDL020C SYO1Q07395 620 aa3.82□□□□□ -1.8
RPN4YDL020C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
RPN4YDL020C LSP1Q12230 341 aaKnown RBP3.82□□□□□ -1.8
RPN4YDL020C RKM5Q12367 367 aa3.82□□□□□ -1.8
RPN4YDL020C GPH1P06738 902 aaKnown RBP3.81□□□□□ -1.8
RPN4YDL020C CDC23P16522 626 aa3.81□□□□□ -1.8
RPN4YDL020C TFB1P32776 642 aa3.81□□□□□ -1.8
RPN4YDL020C SIP2P34164 415 aaKnown RBP3.81□□□□□ -1.8
RPN4YDL020C CBP4P37267 147 aa3.81□□□□□ -1.8
RPN4YDL020C NTC20P38302 140 aaPredicted RBP3.81□□□□□ -1.8
RPN4YDL020C IKS1P47042 667 aa3.81□□□□□ -1.8
RPN4YDL020C YGL138CP53122 345 aa3.81□□□□□ -1.8
RPN4YDL020C RLI1Q03195 608 aaKnown RBP3.81□□□□□ -1.8
RPN4YDL020C AIM32Q04689 311 aa3.81□□□□□ -1.8
RPN4YDL020C MRPL51Q06090 140 aaPredicted RBP3.81□□□□□ -1.8
RPN4YDL020C YDL009CQ12210 107 aa3.81□□□□□ -1.8
RPN4YDL020C CAR1P00812 333 aaKnown RBP3.8□□□□□ -1.8
RPN4YDL020C LEU4P06208 619 aaKnown RBP3.8□□□□□ -1.8
RPN4YDL020C EXO70P19658 623 aa3.8□□□□□ -1.8
RPN4YDL020C ERV1P27882 189 aa3.8□□□□□ -1.8
RPN4YDL020C SEC1P30619 724 aaKnown RBP3.8□□□□□ -1.8
RPN4YDL020C GYP6P32806 458 aa3.8□□□□□ -1.8
RPN4YDL020C NIP100P33420 868 aa3.8□□□□□ -1.8
RPN4YDL020C ARA1P38115 344 aa3.8□□□□□ -1.8
RPN4YDL020C VHC1P38329 1120 aa3.8□□□□□ -1.8
RPN4YDL020C FAU1P40099 211 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms