RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YEL023CP39992 682 aa7.74□□□□□ -1.17
ABP1YCR088W GAB1P41733 394 aa7.74□□□□□ -1.17
ABP1YCR088W GAT1P43574 510 aa7.74□□□□□ -1.17
ABP1YCR088W RAI1P53063 387 aaKnown RBP7.74□□□□□ -1.17
ABP1YCR088W DAM1P53267 343 aa7.74□□□□□ -1.17
ABP1YCR088W ECM11Q04110 302 aa7.74□□□□□ -1.17
ABP1YCR088W SSL1Q04673 461 aaPredicted RBP7.74□□□□□ -1.17
ABP1YCR088W GAL83Q04739 417 aa7.74□□□□□ -1.17
ABP1YCR088W RAD34Q06665 692 aa7.74□□□□□ -1.17
ABP1YCR088W BRE4Q07660 1125 aa7.74□□□□□ -1.17
ABP1YCR088W MAM3Q12296 706 aa7.74□□□□□ -1.17
ABP1YCR088W PHO5P00635 467 aa7.73□□□□□ -1.17
ABP1YCR088W CMK1P27466 446 aaKnown RBP7.73□□□□□ -1.17
ABP1YCR088W SCD5P34758 872 aa7.73□□□□□ -1.17
ABP1YCR088W YKR051WP36142 418 aa7.73□□□□□ -1.17
ABP1YCR088W VMA22P38784 181 aa7.73□□□□□ -1.17
ABP1YCR088W IPT1P38954 527 aa7.73□□□□□ -1.17
ABP1YCR088W YAR028WP39548 234 aa7.73□□□□□ -1.17
ABP1YCR088W COG3P40094 801 aa7.73□□□□□ -1.17
ABP1YCR088W PAN6P40459 309 aa7.73□□□□□ -1.17
ABP1YCR088W ATP22P50273 684 aaPredicted RBP7.73□□□□□ -1.17
ABP1YCR088W SDH1Q00711 640 aa7.73□□□□□ -1.17
ABP1YCR088W YPL107WQ02873 248 aa7.73□□□□□ -1.17
ABP1YCR088W YPQ2Q06328 317 aa7.73□□□□□ -1.17
ABP1YCR088W HBT1Q07653 1046 aaKnown RBP7.73□□□□□ -1.17
ABP1YCR088W MED2Q12124 431 aa7.73□□□□□ -1.17
ABP1YCR088W YLR126CQ12288 251 aa7.73□□□□□ -1.17
ABP1YCR088W MHF1Q3E835 90 aa7.73□□□□□ -1.17
ABP1YCR088W CDC21P06785 304 aa7.72□□□□□ -1.17
ABP1YCR088W MSF1P08425 469 aa7.72□□□□□ -1.17
ABP1YCR088W NFT1P0CE68 1218 aa7.72□□□□□ -1.17
ABP1YCR088W SCH9P11792 824 aaKnown RBP7.72□□□□□ -1.17
ABP1YCR088W MRPL8P22353 238 aa7.72□□□□□ -1.17
ABP1YCR088W ADK2P26364 225 aa7.72□□□□□ -1.17
ABP1YCR088W RPC82P32349 654 aa7.72□□□□□ -1.17
ABP1YCR088W APM3P38153 483 aa7.72□□□□□ -1.17
ABP1YCR088W SLX1P38324 304 aa7.72□□□□□ -1.17
ABP1YCR088W BOL3P39724 118 aa7.72□□□□□ -1.17
ABP1YCR088W RSP5P39940 809 aaKnown RBP7.72□□□□□ -1.17
ABP1YCR088W CWC23P52868 283 aaPredicted RBP7.72□□□□□ -1.17
ABP1YCR088W YNL143CP53908 130 aa7.72□□□□□ -1.17
ABP1YCR088W PPN1Q04119 674 aa7.72□□□□□ -1.17
ABP1YCR088W ARP10Q04549 284 aa7.72□□□□□ -1.17
ABP1YCR088W ENT2Q05785 613 aa7.72□□□□□ -1.17
ABP1YCR088W NUT2Q06213 157 aa7.72□□□□□ -1.17
ABP1YCR088W MFG1Q07684 458 aa7.72□□□□□ -1.17
ABP1YCR088W IRC10Q08118 586 aa7.72□□□□□ -1.17
ABP1YCR088W NGL1Q08213 363 aaKnown RBP7.72□□□□□ -1.17
ABP1YCR088W GSH2Q08220 491 aa7.72□□□□□ -1.17
ABP1YCR088W THP1Q08231 455 aa7.72□□□□□ -1.17
ABP1YCR088W THP3Q12049 470 aaKnown RBP7.72□□□□□ -1.17
ABP1YCR088W YLR125WQ12138 136 aa7.72□□□□□ -1.17
ABP1YCR088W RIB3Q99258 208 aa7.72□□□□□ -1.17
ABP1YCR088W HMG2P12684 1045 aa7.71□□□□□ -1.17
ABP1YCR088W AAR2P32357 355 aaPredicted RBP7.71□□□□□ -1.17
ABP1YCR088W YEL020CP39994 560 aa7.71□□□□□ -1.17
ABP1YCR088W JLP2P40206 208 aa7.71□□□□□ -1.17
ABP1YCR088W SYG1P40528 902 aa7.71□□□□□ -1.17
ABP1YCR088W UFE1P41834 346 aa7.71□□□□□ -1.17
ABP1YCR088W GYP8P43570 497 aa7.71□□□□□ -1.17
ABP1YCR088W FAR7P43592 221 aa7.71□□□□□ -1.17
ABP1YCR088W SPC105P53148 917 aa7.71□□□□□ -1.17
ABP1YCR088W VAC7P53950 1165 aa7.71□□□□□ -1.17
ABP1YCR088W MET31Q03081 177 aa7.71□□□□□ -1.17
ABP1YCR088W ARR1Q06596 294 aa7.71□□□□□ -1.17
ABP1YCR088W YGK3Q12222 375 aaPredicted RBP7.71□□□□□ -1.17
ABP1YCR088W TRM10Q12400 293 aa7.71□□□□□ -1.17
ABP1YCR088W MDM12Q92328 271 aa7.71□□□□□ -1.17
ABP1YCR088W ATP1P07251 545 aaKnown RBP7.71□□□□□ -1.18
ABP1YCR088W PET122P10355 254 aa7.71□□□□□ -1.18
ABP1YCR088W CRM1P30822 1084 aaKnown RBP7.71□□□□□ -1.18
ABP1YCR088W MPM1P40364 252 aa7.71□□□□□ -1.18
ABP1YCR088W LAS21P40367 830 aa7.71□□□□□ -1.18
ABP1YCR088W RPL34BP40525 121 aaKnown RBP7.71□□□□□ -1.18
ABP1YCR088W YFL066CP43538 392 aa7.71□□□□□ -1.18
ABP1YCR088W FRE4P53746 719 aa7.71□□□□□ -1.18
ABP1YCR088W RRP17Q04031 235 aaPredicted RBP7.71□□□□□ -1.18
ABP1YCR088W GSF2Q04697 403 aaKnown RBP7.71□□□□□ -1.18
ABP1YCR088W COA4Q05809 96 aa7.71□□□□□ -1.18
ABP1YCR088W MDM36Q06820 579 aa7.71□□□□□ -1.18
ABP1YCR088W YLL007CQ07799 665 aa7.71□□□□□ -1.18
ABP1YCR088W YLR012CQ07927 99 aa7.71□□□□□ -1.18
ABP1YCR088W SAM4Q08985 325 aaKnown RBP7.71□□□□□ -1.18
ABP1YCR088W PST2Q12335 198 aaKnown RBP7.71□□□□□ -1.18
ABP1YCR088W NDJ1Q12366 352 aa7.71□□□□□ -1.18
ABP1YCR088W PEX11Q12462 236 aa7.71□□□□□ -1.18
ABP1YCR088W MHT1Q12525 324 aa7.71□□□□□ -1.18
ABP1YCR088W FRT1Q99332 602 aa7.71□□□□□ -1.18
ABP1YCR088W YLR422WQ06409 1932 aa7.7□□□□□ -1.18
ABP1YCR088W KAR1P11927 433 aa7.7□□□□□ -1.18
ABP1YCR088W MIH1P23748 554 aa7.7□□□□□ -1.18
ABP1YCR088W POT1P27796 417 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
ABP1YCR088W TSA1P34760 196 aaKnown RBP7.7□□□□□ -1.18
ABP1YCR088W MAC1P35192 417 aa7.7□□□□□ -1.18
ABP1YCR088W IRS4P36115 615 aaKnown RBP7.7□□□□□ -1.18
ABP1YCR088W KTR4P38131 464 aa7.7□□□□□ -1.18
ABP1YCR088W EXO84P38261 753 aa7.7□□□□□ -1.18
ABP1YCR088W VPS25P47142 202 aa7.7□□□□□ -1.18
ABP1YCR088W PEX21P50091 288 aa7.7□□□□□ -1.18
ABP1YCR088W IMD3P50095 523 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms