RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W BOL2P53082 120 aa5.61□□□□□ -1.51
SHP1YBL058W YNL165WP53891 406 aa5.61□□□□□ -1.51
SHP1YBL058W YNL092WP53934 400 aa5.61□□□□□ -1.51
SHP1YBL058W GOT1Q03554 138 aa5.61□□□□□ -1.51
SHP1YBL058W ROY1Q04847 553 aa5.61□□□□□ -1.51
SHP1YBL058W SML1Q04964 104 aa5.61□□□□□ -1.51
SHP1YBL058W YDR338CQ05497 695 aa5.61□□□□□ -1.51
SHP1YBL058W ADE13Q05911 482 aaKnown RBP5.61□□□□□ -1.51
SHP1YBL058W CRN1Q06440 651 aa5.61□□□□□ -1.51
SHP1YBL058W RSC2Q06488 889 aa5.61□□□□□ -1.51
SHP1YBL058W SDH3P33421 198 aa5.6□□□□□ -1.51
SHP1YBL058W MOH1P38191 138 aa5.6□□□□□ -1.51
SHP1YBL058W GGC1P38988 300 aa5.6□□□□□ -1.51
SHP1YBL058W NPT1P39683 429 aaKnown RBP5.6□□□□□ -1.51
SHP1YBL058W GID8P40208 455 aa5.6□□□□□ -1.51
SHP1YBL058W YIL152WP40455 235 aa5.6□□□□□ -1.51
SHP1YBL058W SAE2P46946 345 aa5.6□□□□□ -1.51
SHP1YBL058W HOC1P47124 396 aa5.6□□□□□ -1.51
SHP1YBL058W MDM34P53083 459 aa5.6□□□□□ -1.51
SHP1YBL058W COG6P53959 839 aa5.6□□□□□ -1.51
SHP1YBL058W AKR2Q12013 749 aa5.6□□□□□ -1.51
SHP1YBL058W UBX3Q12229 455 aa5.6□□□□□ -1.51
SHP1YBL058W RGT2Q12300 763 aa5.6□□□□□ -1.51
SHP1YBL058W GLT1Q12680 2145 aaKnown RBP5.59□□□□□ -1.51
SHP1YBL058W RPB2P08518 1224 aaKnown RBP5.59□□□□□ -1.51
SHP1YBL058W SPO16P17122 198 aa5.59□□□□□ -1.51
SHP1YBL058W SEC14P24280 304 aaKnown RBP5.59□□□□□ -1.51
SHP1YBL058W YCR102CP25608 368 aa5.59□□□□□ -1.51
SHP1YBL058W PMT2P31382 759 aa5.59□□□□□ -1.51
SHP1YBL058W PTM1P32857 523 aa5.59□□□□□ -1.51
SHP1YBL058W YKL100CP34248 587 aa5.59□□□□□ -1.51
SHP1YBL058W RPS27AP35997 82 aaKnown RBP5.59□□□□□ -1.51
SHP1YBL058W RRN10P38204 145 aa5.59□□□□□ -1.51
SHP1YBL058W RPS27BP38711 82 aa5.59□□□□□ -1.51
SHP1YBL058W MUP3P38734 546 aa5.59□□□□□ -1.51
SHP1YBL058W SEC28P40509 296 aaKnown RBP5.59□□□□□ -1.51
SHP1YBL058W SAM37P50110 327 aa5.59□□□□□ -1.51
SHP1YBL058W VPS73P53142 486 aaKnown RBP5.59□□□□□ -1.51
SHP1YBL058W LCL3P53153 274 aa5.59□□□□□ -1.51
SHP1YBL058W CLD1P53264 445 aa5.59□□□□□ -1.51
SHP1YBL058W BUD32P53323 261 aa5.59□□□□□ -1.51
SHP1YBL058W TAF12Q03761 539 aa5.59□□□□□ -1.51
SHP1YBL058W BCH1Q05029 724 aa5.59□□□□□ -1.51
SHP1YBL058W BSC2Q05611 235 aa5.59□□□□□ -1.51
SHP1YBL058W OMS1Q06668 471 aa5.59□□□□□ -1.51
SHP1YBL058W NOP6Q07623 225 aaKnown RBP5.59□□□□□ -1.51
SHP1YBL058W MMT2Q08970 484 aa5.59□□□□□ -1.51
SHP1YBL058W STE3P06783 470 aa5.58□□□□□ -1.52
SHP1YBL058W GPA2P10823 449 aa5.58□□□□□ -1.52
SHP1YBL058W PRP6P19735 899 aaPredicted RBP5.58□□□□□ -1.52
SHP1YBL058W DBP2P24783 546 aaKnown RBP5.58□□□□□ -1.52
SHP1YBL058W MCM5P29496 775 aaKnown RBP5.58□□□□□ -1.52
SHP1YBL058W FAA1P30624 700 aaKnown RBP5.58□□□□□ -1.52
SHP1YBL058W GCG1P32656 232 aaKnown RBP5.58□□□□□ -1.52
SHP1YBL058W KKQ8P36004 724 aa5.58□□□□□ -1.52
SHP1YBL058W GPI16P38875 610 aa5.58□□□□□ -1.52
SHP1YBL058W MAD1P40957 749 aa5.58□□□□□ -1.52
SHP1YBL058W ERG13P54839 491 aaKnown RBP5.58□□□□□ -1.52
SHP1YBL058W XYL2Q07993 356 aa5.58□□□□□ -1.52
SHP1YBL058W RRP42Q12277 265 aaPredicted RBP5.58□□□□□ -1.52
SHP1YBL058W GLO4Q12320 285 aa5.58□□□□□ -1.52
SHP1YBL058W YMR030W-AQ3E760 96 aa5.58□□□□□ -1.52
SHP1YBL058W SRN2Q99176 213 aa5.58□□□□□ -1.52
SHP1YBL058W RPS21AP0C0V8 87 aaKnown RBP5.57□□□□□ -1.52
SHP1YBL058W TRX2P22803 104 aaKnown RBP5.57□□□□□ -1.52
SHP1YBL058W AAD3P25612 363 aa5.57□□□□□ -1.52
SHP1YBL058W RIM1P32445 135 aaKnown RBP5.57□□□□□ -1.52
SHP1YBL058W ATO2P32907 282 aa5.57□□□□□ -1.52
SHP1YBL058W NUP120P35729 1037 aa5.57□□□□□ -1.52
SHP1YBL058W DSS1P39112 969 aa5.57□□□□□ -1.52
SHP1YBL058W YER034WP40022 185 aaKnown RBP5.57□□□□□ -1.52
SHP1YBL058W HOS4P40480 1083 aa5.57□□□□□ -1.52
SHP1YBL058W BAP3P41815 604 aa5.57□□□□□ -1.52
SHP1YBL058W YNL320WP42840 284 aa5.57□□□□□ -1.52
SHP1YBL058W GCD14P46959 383 aaPredicted RBP5.57□□□□□ -1.52
SHP1YBL058W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SHP1YBL058W YJR098CP47139 656 aa5.57□□□□□ -1.52
SHP1YBL058W OCA1P50946 238 aaPredicted RBP5.57□□□□□ -1.52
SHP1YBL058W TEL2P53038 688 aa5.57□□□□□ -1.52
SHP1YBL058W PRP38Q00723 242 aaPredicted RBP5.57□□□□□ -1.52
SHP1YBL058W SNP1Q00916 300 aaPredicted RBP5.57□□□□□ -1.52
SHP1YBL058W NUP53Q03790 475 aa5.57□□□□□ -1.52
SHP1YBL058W VTI1Q04338 217 aa5.57□□□□□ -1.52
SHP1YBL058W SPO20Q04359 397 aa5.57□□□□□ -1.52
SHP1YBL058W YLR346CQ06139 101 aa5.57□□□□□ -1.52
SHP1YBL058W VAM6Q07468 1049 aa5.57□□□□□ -1.52
SHP1YBL058W YOL159CQ08300 171 aa5.57□□□□□ -1.52
SHP1YBL058W YOR342CQ12182 319 aa5.57□□□□□ -1.52
SHP1YBL058W YPR011CQ12251 326 aa5.57□□□□□ -1.52
SHP1YBL058W TPO4Q12256 659 aa5.57□□□□□ -1.52
SHP1YBL058W AI3P03877 415 aa5.56□□□□□ -1.52
SHP1YBL058W HEM15P16622 393 aa5.56□□□□□ -1.52
SHP1YBL058W GRR1P24814 1151 aa5.56□□□□□ -1.52
SHP1YBL058W CMK1P27466 446 aaKnown RBP5.56□□□□□ -1.52
SHP1YBL058W HXT4P32467 576 aa5.56□□□□□ -1.52
SHP1YBL058W MIA40P36046 403 aa5.56□□□□□ -1.52
SHP1YBL058W APT2P36973 181 aa5.56□□□□□ -1.52
SHP1YBL058W HXT6P39003 570 aaKnown RBP5.56□□□□□ -1.52
SHP1YBL058W HXT7P39004 570 aa5.56□□□□□ -1.52
SHP1YBL058W NDC80P40460 691 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms