RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C SAS5Q99314 248 aa12.98□□□□□ -0.33
SSA1YAL005C MEI5P32489 222 aa12.97□□□□□ -0.33
SSA1YAL005C PET309P32522 965 aaPredicted RBP12.97□□□□□ -0.33
SSA1YAL005C GGC1P38988 300 aa12.97□□□□□ -0.33
SSA1YAL005C YAL037WP39728 267 aa12.97□□□□□ -0.33
SSA1YAL005C ERG26P53199 349 aaKnown RBP12.97□□□□□ -0.33
SSA1YAL005C YNR021WP53723 404 aaKnown RBP12.97□□□□□ -0.33
SSA1YAL005C PRP38Q00723 242 aaPredicted RBP12.97□□□□□ -0.33
SSA1YAL005C SGT1Q08446 395 aa12.97□□□□□ -0.33
SSA1YAL005C HAL9Q12180 1030 aa12.97□□□□□ -0.33
SSA1YAL005C YCL012CQ8J0M4 134 aa12.97□□□□□ -0.33
SSA1YAL005C RPC82P32349 654 aa12.96□□□□□ -0.33
SSA1YAL005C FRE2P36033 711 aa12.96□□□□□ -0.33
SSA1YAL005C TRM5P38793 499 aa12.96□□□□□ -0.33
SSA1YAL005C KXD1P53158 218 aa12.96□□□□□ -0.33
SSA1YAL005C YML096WQ04489 525 aa12.96□□□□□ -0.33
SSA1YAL005C RRP15Q06511 250 aaPredicted RBP12.96□□□□□ -0.33
SSA1YAL005C NFI1Q12216 726 aa12.96□□□□□ -0.33
SSA1YAL005C CAN1P04817 590 aa12.96□□□□□ -0.34
SSA1YAL005C LEU4P06208 619 aaKnown RBP12.96□□□□□ -0.34
SSA1YAL005C ERG6P25087 383 aaKnown RBP12.96□□□□□ -0.34
SSA1YAL005C GBP2P25555 427 aaKnown RBP RIP-Chip data12.96□□□□□ -0.34not detected
SSA1YAL005C SSE1P32589 693 aaKnown RBP12.96□□□□□ -0.34
SSA1YAL005C MAP2P38174 421 aaKnown RBP12.96□□□□□ -0.34
SSA1YAL005C CEM1P39525 442 aa12.96□□□□□ -0.34
SSA1YAL005C IMA1P53051 589 aa12.96□□□□□ -0.34
SSA1YAL005C GIP3Q03016 1276 aa12.96□□□□□ -0.34
SSA1YAL005C MET31Q03081 177 aa12.96□□□□□ -0.34
SSA1YAL005C YLR413WQ06689 675 aa12.96□□□□□ -0.34
SSA1YAL005C UAF30Q08747 228 aa12.96□□□□□ -0.34
SSA1YAL005C YVC1Q12324 675 aa12.96□□□□□ -0.34
SSA1YAL005C KIN2P13186 1147 aaKnown RBP12.95□□□□□ -0.34
SSA1YAL005C PWP1P21304 576 aaKnown RBP12.95□□□□□ -0.34
SSA1YAL005C PLB1P39105 664 aa12.95□□□□□ -0.34
SSA1YAL005C SUM1P46676 1062 aa12.95□□□□□ -0.34
SSA1YAL005C YOL087CQ99247 1116 aa12.95□□□□□ -0.34
SSA1YAL005C RPS21AP0C0V8 87 aaKnown RBP12.94□□□□□ -0.34
SSA1YAL005C TRX3P25372 127 aa12.94□□□□□ -0.34
SSA1YAL005C UTH1P36135 365 aa12.94□□□□□ -0.34
SSA1YAL005C RGA1P39083 1007 aa12.94□□□□□ -0.34
SSA1YAL005C CAB2P40506 365 aa12.94□□□□□ -0.34
SSA1YAL005C COG2P53271 262 aa12.94□□□□□ -0.34
SSA1YAL005C JLP1Q12358 412 aa12.94□□□□□ -0.34
SSA1YAL005C YLR111WQ12528 110 aa12.94□□□□□ -0.34
SSA1YAL005C MDM35O60200 86 aa12.94□□□□□ -0.34
SSA1YAL005C HTA2P04912 132 aa12.94□□□□□ -0.34
SSA1YAL005C RDS2P19541 446 aaKnown RBP12.94□□□□□ -0.34
SSA1YAL005C RNQ1P25367 405 aa12.94□□□□□ -0.34
SSA1YAL005C NRP1P32770 719 aaKnown RBP RIP-Chip data12.94□□□□□ -0.34not detected
SSA1YAL005C NTR2P36118 322 aaPredicted RBP12.94□□□□□ -0.34
SSA1YAL005C YKR078WP36158 585 aaKnown RBP12.94□□□□□ -0.34
SSA1YAL005C YBR071WP38243 211 aa12.94□□□□□ -0.34
SSA1YAL005C LTP1P40347 161 aa12.94□□□□□ -0.34
SSA1YAL005C RPL17BP46990 184 aaKnown RBP12.94□□□□□ -0.34
SSA1YAL005C TIM54P47045 478 aa12.94□□□□□ -0.34
SSA1YAL005C GTO1P48239 356 aa12.94□□□□□ -0.34
SSA1YAL005C OCA1P50946 238 aaPredicted RBP12.94□□□□□ -0.34
SSA1YAL005C MIG2P53035 382 aa12.94□□□□□ -0.34
SSA1YAL005C YDR476CQ03362 224 aa12.94□□□□□ -0.34
SSA1YAL005C YKL018C-AQ3E7A7 99 aa12.94□□□□□ -0.34
SSA1YAL005C PHO91P27514 894 aa12.93□□□□□ -0.34
SSA1YAL005C ARC19P33204 171 aaKnown RBP12.93□□□□□ -0.34
SSA1YAL005C KKQ8P36004 724 aa12.93□□□□□ -0.34
SSA1YAL005C SIC1P38634 284 aa12.93□□□□□ -0.34
SSA1YAL005C AXL2P38928 823 aa12.93□□□□□ -0.34
SSA1YAL005C HPM1P40481 377 aa12.93□□□□□ -0.34
SSA1YAL005C ALG12P53730 551 aa12.93□□□□□ -0.34
SSA1YAL005C PRO2P54885 456 aaKnown RBP12.93□□□□□ -0.34
SSA1YAL005C BRR1Q99177 341 aaPredicted RBP12.93□□□□□ -0.34
SSA1YAL005C IRA2P19158 3079 aa12.93□□□□□ -0.34
SSA1YAL005C PHO81P17442 1178 aa12.92□□□□□ -0.34
SSA1YAL005C MEF1P25039 761 aa12.92□□□□□ -0.34
SSA1YAL005C FUN30P31380 1131 aa12.92□□□□□ -0.34
SSA1YAL005C CBP4P37267 147 aa12.92□□□□□ -0.34
SSA1YAL005C ARA1P38115 344 aa12.92□□□□□ -0.34
SSA1YAL005C MET12P46151 657 aa12.92□□□□□ -0.34
SSA1YAL005C ARC35P53731 342 aaKnown RBP12.92□□□□□ -0.34
SSA1YAL005C RHO3Q00245 231 aaKnown RBP12.92□□□□□ -0.34
SSA1YAL005C ECM11Q04110 302 aa12.92□□□□□ -0.34
SSA1YAL005C PDC5P16467 563 aaKnown RBP12.92□□□□□ -0.34
SSA1YAL005C SNF5P18480 905 aa12.92□□□□□ -0.34
SSA1YAL005C CDC3P32457 520 aaKnown RBP12.92□□□□□ -0.34
SSA1YAL005C FZO1P38297 855 aa12.92□□□□□ -0.34
SSA1YAL005C MET30P39014 640 aa12.92□□□□□ -0.34
SSA1YAL005C RLP7P40693 322 aaKnown RBP12.92□□□□□ -0.34
SSA1YAL005C SNX3Q08826 162 aaKnown RBP12.92□□□□□ -0.34
SSA1YAL005C YOR114WQ12219 294 aa12.92□□□□□ -0.34
SSA1YAL005C RKM5Q12367 367 aa12.92□□□□□ -0.34
SSA1YAL005C CCA1P21269 546 aa12.91□□□□□ -0.34
SSA1YAL005C SAN1P22470 610 aa12.91□□□□□ -0.34
SSA1YAL005C YCR087C-AP37263 153 aa12.91□□□□□ -0.34
SSA1YAL005C FTH1P38310 465 aa12.91□□□□□ -0.34
SSA1YAL005C YHR033WP38690 423 aa12.91□□□□□ -0.34
SSA1YAL005C LYS1P38998 373 aaRIP-Chip data12.91□□□□□ -0.34not detected
SSA1YAL005C MPS3P47069 682 aa12.91□□□□□ -0.34
SSA1YAL005C EGD1Q02642 157 aaKnown RBP12.91□□□□□ -0.34
SSA1YAL005C YDL129WQ07555 291 aa12.91□□□□□ -0.34
SSA1YAL005C RTK1Q12100 620 aaPredicted RBP12.91□□□□□ -0.34
SSA1YAL005C ACC1Q00955 2233 aaKnown RBP12.91□□□□□ -0.34
SSA1YAL005C ATO2P32907 282 aa12.9□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms