RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 KIAA0825Q8IV33 1275 aa13.78□□□□□ -0.2
SPIN3-236ENST00000640131 KIRREL3Q8IZU9 778 aa13.78□□□□□ -0.2
SPIN3-236ENST00000640131 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
SPIN3-236ENST00000640131 DESI2Q9BSY9 194 aa13.78□□□□□ -0.2
SPIN3-236ENST00000640131 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
SPIN3-236ENST00000640131 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 STXBP3O00186 592 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 EBAG9O00559 213 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 BBOX1O75936 387 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 PARP1P09874 1014 aaKnown RBP13.77□□□□□ -0.2
SPIN3-236ENST00000640131 SLC16A2P36021 539 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 VSTM4Q8IW00 320 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 GJA10Q969M2 543 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 FERMT2Q96AC1 680 aa13.77□□□□□ -0.2
SPIN3-236ENST00000640131 CHCHD3Q9NX63 227 aaKnown RBP13.77□□□□□ -0.2
SPIN3-236ENST00000640131 CCNT1O60563 726 aaKnown RBP13.77□□□□□ -0.21
SPIN3-236ENST00000640131 CCT5P48643 541 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 NFIAQ12857 509 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 NAA25Q14CX7 972 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 ZFPM1Q8IX07 1006 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 CCDC151A5D8V7 595 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 MYO1FO00160 1098 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 PES1O00541 588 aaKnown RBP13.77□□□□□ -0.21
SPIN3-236ENST00000640131 RGL2O15211 777 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 PDE6BP35913 854 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 STAT6P42226 847 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 C16orf86Q6ZW13 317 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 HDXQ7Z353 690 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 CCDC102AQ96A19 550 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 CRACR2AQ9BSW2 395 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 FAM204AQ9H8W3 233 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 USP40Q9NVE5 1235 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 IMPACTQ9P2X3 320 aa13.77□□□□□ -0.21
SPIN3-236ENST00000640131 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
SPIN3-236ENST00000640131 TRIM49BA6NDI0 452 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 SMCO2A6NFE2 343 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 PYGLP06737 847 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 SETSIPP0DME0 302 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 MTF1Q14872 753 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 WLSQ5T9L3 541 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 MLKLQ8NB16 471 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
SPIN3-236ENST00000640131 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 RINLQ6ZS11 566 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 LRRC15Q8TF66 581 aa13.76□□□□□ -0.21
SPIN3-236ENST00000640131 PALM3A6NDB9 673 aaPredicted RBP13.75□□□□□ -0.21
SPIN3-236ENST00000640131 CALML3P27482 149 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 BRD3Q15059 726 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 FAM71BQ8TC56 605 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 VPS16Q9H269 839 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 PRPHP41219 470 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 RAB27AP51159 221 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 NT5DC1Q5TFE4 455 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 DTHD1Q6ZMT9 781 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 KCTD1Q719H9 257 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 HPS3Q969F9 1004 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
SPIN3-236ENST00000640131 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
SPIN3-236ENST00000640131 G3BP2Q9UN86 482 aaKnown RBP13.75□□□□□ -0.21
SPIN3-236ENST00000640131 TAL1P17542 331 aaPredicted RBP13.74□□□□□ -0.21
SPIN3-236ENST00000640131 CHRNA5P30532 468 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 TECP42680 631 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 TMEM132AQ24JP5 1023 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 PDXDC2PQ6P474 469 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 TMX4Q9H1E5 349 aaPredicted RBP13.74□□□□□ -0.21
SPIN3-236ENST00000640131 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 A0A0U1RQJ8 604 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 ENO4A6NNW6 628 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 PPP1R3GB7ZBB8 358 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 SRGNP10124 158 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 ZNF18P17022 549 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 POLD1P28340 1107 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 UBA7P41226 1012 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 MAGEA8P43361 318 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 SNAP25P60880 206 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 UBE2SQ16763 222 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
SPIN3-236ENST00000640131 C4orf32Q8N8J7 132 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 SPDYE1Q8NFV5 336 aaPredicted RBP13.74□□□□□ -0.21
SPIN3-236ENST00000640131 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 ENOX1Q8TC92 643 aaKnown RBP13.74□□□□□ -0.21
SPIN3-236ENST00000640131 ATRIPQ8WXE1 791 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 TAB2Q9NYJ8 693 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 MYH8P13535 1937 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 ACTN3Q08043 901 aaPredicted RBP13.74□□□□□ -0.21
SPIN3-236ENST00000640131 SLC27A3Q5K4L6 730 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 SPDL1Q96EA4 605 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 SAAL1Q96ER3 474 aa13.74□□□□□ -0.21
SPIN3-236ENST00000640131 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
SPIN3-236ENST00000640131 ATP6V0A2Q9Y487 856 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms