RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 HERC6Q8IVU3 1022 aa17.65■□□□□ 0.42
SYNE2-228ENST00000639659 CLEC4DQ8WXI8 215 aa17.65■□□□□ 0.42
SYNE2-228ENST00000639659 ANAPC4Q9UJX5 808 aa17.65■□□□□ 0.42
SYNE2-228ENST00000639659 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
SYNE2-228ENST00000639659 COL4A4P53420 1690 aaPredicted RBP17.64■□□□□ 0.42
SYNE2-228ENST00000639659 RBM47A0AV96 593 aaKnown RBP17.64■□□□□ 0.41
SYNE2-228ENST00000639659 NKRFO15226 690 aaKnown RBP eCLIP17.64■□□□□ 0.41
SYNE2-228ENST00000639659 TLL1O43897 1013 aa17.64■□□□□ 0.41
SYNE2-228ENST00000639659 PDHBP11177 359 aa17.64■□□□□ 0.41
SYNE2-228ENST00000639659 PTGISQ16647 500 aa17.64■□□□□ 0.41
SYNE2-228ENST00000639659 NFRKBQ6P4R8 1299 aa17.64■□□□□ 0.41
SYNE2-228ENST00000639659 SPRED2Q7Z698 418 aa17.64■□□□□ 0.41
SYNE2-228ENST00000639659 TMCO2Q7Z6W1 182 aaPredicted RBP17.64■□□□□ 0.41
SYNE2-228ENST00000639659 NCOR1O75376 2440 aa17.64■□□□□ 0.41
SYNE2-228ENST00000639659 TRANK1O15050 2925 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 LOC102724159A0A0B4J2E5 919 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 PITPNM1O00562 1244 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 KPNA6O60684 536 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 ARIH2O95376 493 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 GOLGA8HP0CJ92 632 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 PLA2G5P39877 138 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 PWP2Q15269 919 aaKnown RBP17.63■□□□□ 0.41
SYNE2-228ENST00000639659 SEPT14Q6ZU15 432 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 CCDC155Q8N6L0 562 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 FAM227BQ96M60 508 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 ZBED2Q9BTP6 218 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 C1QTNF1Q9BXJ1 281 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 CPVLQ9H3G5 476 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 XIRP2A4UGR9 3374 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 BDP1A6H8Y1 2624 aa17.63■□□□□ 0.41
SYNE2-228ENST00000639659 TRIP12Q14669 1992 aaPredicted RBP17.62■□□□□ 0.41
SYNE2-228ENST00000639659 TET1Q8NFU7 2136 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 A0A0D9SFI3 127 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 A6NJR5 290 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 B4DLN1 442 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 RBAK-RBAKDNI3L0D1 243 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 FGAP02671 866 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 MRPL12P52815 198 aaKnown RBP17.62■□□□□ 0.41
SYNE2-228ENST00000639659 ZNF543Q08ER8 600 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 GRB10Q13322 594 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 ANKRD45Q5TZF3 282 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 PHOSPHO2Q8TCD6 241 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 GDPD5Q8WTR4 605 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 AFG1LQ8WV93 481 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 ZKSCAN3Q9BRR0 538 aa17.62■□□□□ 0.41
SYNE2-228ENST00000639659 NOVP48745 357 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
SYNE2-228ENST00000639659 LY6KQ17RY6 165 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 DNERQ8NFT8 737 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 HLA-CQ95604 372 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 UBA5Q9GZZ9 404 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 HELLSQ9NRZ9 838 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 COG5Q9UP83 839 aa17.61■□□□□ 0.41
SYNE2-228ENST00000639659 PTPRSQ13332 1948 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 LCHNA4D1U4 455 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 DHX16O60231 1041 aaKnown RBP17.6■□□□□ 0.41
SYNE2-228ENST00000639659 BAIAP3O94812 1187 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 MMP3P08254 477 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 EDNRBP24530 442 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 ALX1Q15699 326 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 GDF6Q6KF10 455 aaPredicted RBP17.6■□□□□ 0.41
SYNE2-228ENST00000639659 FAM117BQ6P1L5 589 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 CRBNQ96SW2 442 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 ALG1Q9BT22 464 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 EPHX3Q9H6B9 360 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
SYNE2-228ENST00000639659 TRIM6-TRIM34B2RNG4 842 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 GH1P01241 217 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 FGRP09769 529 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 HSPD1P10809 573 aaKnown RBP17.59■□□□□ 0.41
SYNE2-228ENST00000639659 WDR5P61964 334 aaKnown RBP17.59■□□□□ 0.41
SYNE2-228ENST00000639659 DEFB103AP81534 67 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 NMIQ13287 307 aaPredicted RBP17.59■□□□□ 0.41
SYNE2-228ENST00000639659 CDC37Q16543 378 aaPredicted RBP17.59■□□□□ 0.41
SYNE2-228ENST00000639659 MCMDC2Q4G0Z9 681 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 LRRC8DQ7L1W4 858 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 ZNF589Q86UQ0 364 aaPredicted RBP17.59■□□□□ 0.41
SYNE2-228ENST00000639659 TBC1D10CQ8IV04 446 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 AFAP1L1Q8TED9 768 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 TCP11L1Q9NUJ3 509 aa17.59■□□□□ 0.41
SYNE2-228ENST00000639659 NEDD4P46934 1319 aa17.58■□□□□ 0.4
SYNE2-228ENST00000639659 SORBS3O60504 671 aa17.58■□□□□ 0.4
SYNE2-228ENST00000639659 SELPP16109 830 aa17.58■□□□□ 0.4
SYNE2-228ENST00000639659 POU3F3P20264 500 aaPredicted RBP17.58■□□□□ 0.4
SYNE2-228ENST00000639659 CAGE1Q8TC20 777 aa17.58■□□□□ 0.4
SYNE2-228ENST00000639659 TBC1D5Q92609 795 aa17.58■□□□□ 0.4
SYNE2-228ENST00000639659 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.4
SYNE2-228ENST00000639659 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
SYNE2-228ENST00000639659 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
SYNE2-228ENST00000639659 C7orf31Q8N865 590 aa17.57■□□□□ 0.4
SYNE2-228ENST00000639659 DHX38Q92620 1227 aaKnown RBP17.57■□□□□ 0.4
SYNE2-228ENST00000639659 RILPL2Q969X0 211 aa17.57■□□□□ 0.4
SYNE2-228ENST00000639659 HCN4Q9Y3Q4 1203 aa17.57■□□□□ 0.4
SYNE2-228ENST00000639659 CCDC171Q6TFL3 1326 aa17.56■□□□□ 0.4
SYNE2-228ENST00000639659 FAM86C2PA6NEL3 165 aa17.56■□□□□ 0.4
SYNE2-228ENST00000639659 ZNF286BP0CG31 522 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms