RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 UBXN1Q04323 297 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 PPARAQ07869 468 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 HHATQ5VTY9 493 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 ZNF507Q8TCN5 953 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 LRRC45Q96CN5 670 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 NAF1Q96HR8 494 aaKnown RBP13.24□□□□□ -0.29
CAPN3-221ENST00000638141 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-221ENST00000638141 VPS16Q9H269 839 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 ANAPC4Q9UJX5 808 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 DISP2A7MBM2 1401 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 PDS5AQ29RF7 1337 aaKnown RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 MYH7BA7E2Y1 1941 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 BCL9O00512 1426 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 HEXIM1O94992 359 aaKnown RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 FMNL1O95466 1100 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 MMP1P03956 469 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 MYBP10242 640 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 PROSER3Q2NL68 480 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 CFAP221Q4G0U5 840 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 PNMA8AQ86V59 439 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 KLHDC4Q8TBB5 520 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 PAGE5Q96GU1 130 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 FAM129AQ9BZQ8 928 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 RBM12Q9NTZ6 932 aaKnown RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 TAB2Q9NYJ8 693 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 LRRC42Q9Y546 428 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 H7C1D1 291 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 M0R2C6 588 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 LCA5LO95447 670 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 CHGBP05060 677 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 PYGBP11216 843 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 ATP2A2P16615 1042 aaKnown RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 MTMR3Q13615 1198 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 NTRK3Q16288 839 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 LRRC23Q53EV4 343 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-221ENST00000638141 FIGNQ5HY92 759 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 TEKT4Q8WW24 435 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 RMND1Q9NWS8 449 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 CTNND2Q9UQB3 1225 aa13.23□□□□□ -0.29
CAPN3-221ENST00000638141 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 DPPA5A6NC42 116 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 NUTM2BA6NNL0 878 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 NUTM2EB1AL46 878 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 KCNQ3O43525 872 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 EEF1GP26641 437 aaKnown RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 ZBED6P86452 979 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 SSRP1Q08945 709 aaKnown RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 PAK1Q13153 545 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 NUGGCQ68CJ6 796 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 ZNF317Q96PQ6 595 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 A0A1W2PQJ5 194 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 BHMG1C9JSJ3 638 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 ZNF213O14771 459 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 PJA2O43164 708 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 GRIN1Q05586 938 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 CUL1Q13616 776 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 LMNTD2Q8IXW0 634 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 GBP7Q8N8V2 638 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 CASKIN2Q8WXE0 1202 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 XPO6Q96QU8 1125 aaKnown RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 CCDC134Q9H6E4 229 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 CAPN6Q9Y6Q1 641 aa13.22□□□□□ -0.29
CAPN3-221ENST00000638141 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
CAPN3-221ENST00000638141 MACROD2A1Z1Q3 448 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 ZBTB43O43298 467 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 HNRNPH3P31942 346 aaKnown RBP13.21□□□□□ -0.29
CAPN3-221ENST00000638141 DNM2P50570 870 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 SPA17Q15506 151 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 GNPTABQ3T906 1256 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 TRPM8Q7Z2W7 1104 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 AIFM3Q96NN9 605 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 ISCUQ9H1K1 167 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 LGR6Q9HBX8 967 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 NDUFB9Q9Y6M9 179 aa13.21□□□□□ -0.29
CAPN3-221ENST00000638141 A0A0G2JS52 829 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 ATP2C2O75185 946 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 BAG3O95817 575 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 FGAP02671 866 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 IFNAR1P17181 557 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 HSD17B3P37058 310 aa13.21□□□□□ -0.3
CAPN3-221ENST00000638141 MXRA7P84157 204 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms