RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 CCDC70Q6NSX1 233 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 AMOTL1Q8IY63 956 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 IQCDQ96DY2 449 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 NDST4Q9H3R1 872 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 FAM207AQ9NSI2 230 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 DMGDHQ9UI17 866 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 STX8Q9UNK0 236 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 SHOX2O60902 331 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 PRLRP16471 622 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 ITIH3Q06033 890 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 SMIM5Q71RC9 77 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 SND1Q7KZF4 910 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 NEK8Q86SG6 692 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 SPATA4Q8NEY3 305 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 OSBPL9Q96SU4 736 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 LZTS2Q9BRK4 669 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 MYMKA6NI61 221 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 RASA1P20936 1047 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 MAGEA9P43362 315 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 MRPS25P82663 173 aaKnown RBP11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 GRB10Q13322 594 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 NFRKBQ6P4R8 1299 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 GPIHBP1Q8IV16 184 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 LINC00116Q8NCU8 138 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 FAM76AQ8TAV0 307 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 RRP36Q96EU6 259 aaKnown RBP11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 CALML4Q96GE6 196 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 SPZ1Q9BXG8 430 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
SMARCA2-265ENST00000638139 IRS2Q9Y4H2 1338 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 GOLGA6CA6NDK9 693 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 ANKRD65E5RJM6 399 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 GOLGA6DP0CG33 693 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 CORO7P57737 925 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 SV2BQ7L1I2 683 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 DEF6Q9H4E7 631 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 C6orf50Q9HD87 102 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 GOLGA6AQ9NYA3 693 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 SMARCAL1Q9NZC9 954 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 EHD2Q9NZN4 543 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 HYOU1Q9Y4L1 999 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 LRRC53A6NM62 1247 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 KCNQ2O43526 872 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 AKR1B10O60218 316 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 CXCR5P32302 372 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 TXKP42681 527 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 SLC7A5Q01650 507 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 DIXDC1Q155Q3 683 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 RRAGAQ7L523 313 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 CCDC24Q8N4L8 307 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 TBCKQ8TEA7 893 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 TGFBRAP1Q8WUH2 860 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 RUBCNQ92622 972 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 PNMA5Q96PV4 448 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 PSMB7Q99436 277 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 SAP30BPQ9UHR5 308 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 SALL4Q9UJQ4 1053 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 SBF2Q86WG5 1849 aa11.17□□□□□ -0.62
SMARCA2-265ENST00000638139 SPATA31A1Q5TZJ5 1347 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 NCK2O43639 380 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 LDHBP07195 334 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 TCP1P17987 556 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 GNA11P29992 359 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 MAGEA1P43355 309 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 GRIK5Q16478 980 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 BAP1Q92560 729 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 BIN2Q9UBW5 565 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 PVALEFA0A1B0GWK0 134 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 PJA2O43164 708 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 IRAK1P51617 712 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 KCNQ4P56696 695 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 ATP2B2Q01814 1243 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 HAUS3Q68CZ6 603 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 DYMQ7RTS9 669 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 CCDC84Q86UT8 332 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 MAPKAPK5Q8IW41 473 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 ALS2CR12Q96Q35 445 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 VAT1LQ9HCJ6 419 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
SMARCA2-265ENST00000638139 ABCB11O95342 1321 aa11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 ASTE1Q2TB18 679 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 DNAJC21Q5F1R6 531 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 SOGA3Q5TF21 947 aa11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 PDXDC1Q6P996 788 aa11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 TSEN2Q8NCE0 465 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-265ENST00000638139 MTMR9Q96QG7 549 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms