RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	SUPT20HL2	P0C7V6	817 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PTH1R	Q03431	593 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	MUM1L1	Q5H9M0	696 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TMEM67	Q5HYA8	995 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	DEFB128	Q7Z7B8	93 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	NEDD1	Q8NHV4	660 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	GMCL1	Q96IK5	515 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CERS4	Q9HA82	394 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CYP39A1	Q9NYL5	469 aa		11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RBM8A	Q9Y5S9	174 aa	Known RBP	11.08	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CHD7	Q9P2D1	2997 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ORC4	O43929	436 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CYP2C9	P11712	490 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	SNAP25	P60880	206 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TFAP4	Q01664	338 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	NSMF	Q6X4W1	530 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	KCTD1	Q719H9	257 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	KRT23	Q9C075	422 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	UPF2	Q9HAU5	1272 aa	Known RBP	11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	VTA1	Q9NP79	307 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TOMM22	Q9NS69	142 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TRMT13	Q9NUP7	481 aa	Known RBP	11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	MTCH2	Q9Y6C9	303 aa		11.07	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PLA2G6	O60733	806 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	FGR	P09769	529 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ACTN1	P12814	892 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	POU3F3	P20264	500 aa	Predicted RBP	11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	HAND2	P61296	217 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CTDSPL2	Q05D32	466 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	KRT32	Q14532	448 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	NECTIN1	Q15223	517 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	DUSP28	Q4G0W2	176 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CCDC178	Q5BJE1	867 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	MORC4	Q8TE76	937 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ESR2	Q92731	530 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PURB	Q96QR8	312 aa	Known RBP	11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	POLR3E	Q9NVU0	708 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CCPG1	Q9ULG6	757 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PRR12	Q9ULL5	1215 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TNKS	O95271	1327 aa		11.06	□□□□□ -0.64
CACNA1A-256	ENST00000637981	REV3L	O60673	3130 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	EPOP	A6NHQ4	379 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TSPY2	A6NKD2	308 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RANBP6	O60518	1105 aa	Known RBP	11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	MYL3	P08590	195 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CYP21A2	P08686	494 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CPT1A	P50416	773 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PURA	Q00577	322 aa	Known RBP	11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	FAM47C	Q5HY64	1035 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CREB3L3	Q68CJ9	461 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	KRT40	Q6A162	431 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RCSD1	Q6JBY9	416 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RASGRP2	Q7LDG7	609 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RALYL	Q86SE5	291 aa	Known RBP	11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	NCOA7	Q8NI08	942 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ARNTL2	Q8WYA1	636 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	SLC9A7	Q96T83	725 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	WDR11	Q9BZH6	1224 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	GPHN	Q9NQX3	736 aa	Predicted RBP	11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	STX8	Q9UNK0	236 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	COG5	Q9UP83	839 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	MTMR7	Q9Y216	660 aa		11.05	□□□□□ -0.64
CACNA1A-256	ENST00000637981	SCN5A	Q14524	2016 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	SLC27A2	O14975	620 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ICAM1	P05362	532 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	HSPA4	P34932	840 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RFC2	P35250	354 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ALDH5A1	P51649	535 aa	Predicted RBP	11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TAP1	Q03518	808 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	BAAT	Q14032	418 aa	Predicted RBP	11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TSGA10IP	Q3SY00	556 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	C8orf34	Q49A92	452 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RRP12	Q5JTH9	1297 aa	Known RBP	11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	IQCA1	Q86XH1	822 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	OR6J1	Q8NGC5	347 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PHOSPHO2	Q8TCD6	241 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	MTG1	Q9BT17	334 aa	Predicted RBP	11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	USP26	Q9BXU7	913 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	EPHX3	Q9H6B9	360 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ADD3	Q9UEY8	706 aa	Known RBP	11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	HCN4	Q9Y3Q4	1203 aa		11.04	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PTPDC1	A2A3K4	754 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	KIF28P	B7ZC32	967 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981		E7EWF7	191 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TLL1	O43897	1013 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	NMT2	O60551	498 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	ARHGEF15	O94989	841 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	HMGB1	P09429	215 aa	Known RBP	11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	IQCF3	P0C7M6	154 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PSMA5	P28066	241 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	SART3	Q15020	963 aa	Known RBP	11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	CCDC96	Q2M329	555 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	NBPF20	Q3BBV1	942 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	BRDT	Q58F21	947 aa	Predicted RBP	11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	TBC1D10C	Q8IV04	446 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	HERC6	Q8IVU3	1022 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	RETREG2	Q8NC44	543 aa		11.03	□□□□□ -0.64
CACNA1A-256	ENST00000637981	PPP1R13L	Q8WUF5	828 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms