RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TCP1P17987 556 aaKnown RBP22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 VWA3BQ502W6 1294 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 USP17L1Q7RTZ2 530 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 ZSCAN29Q8IWY8 852 aaPredicted RBP22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 PNMA1Q8ND90 353 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 CCSER1Q9C0I3 900 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 CENPHQ9H3R5 247 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 TCP11L1Q9NUJ3 509 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 SIK3Q9Y2K2 1263 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 CICQ96RK0 1608 aaPredicted RBP22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 FLT1P17948 1338 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 MECOMQ03112 1051 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 PTPROQ16827 1216 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 TDRD12Q587J7 1177 aaKnown RBP22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 KLHDC7AQ5VTJ3 777 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 EMBQ6PCB8 327 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 C3orf67Q6ZVT6 689 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 FAM114A1Q8IWE2 563 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 IL17RBQ9NRM6 502 aa22.39■■□□□ 1.17
CACNA1A-243ENST00000637616 H0YHG0 523 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 CYTH3O43739 400 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 KIF5BP33176 963 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 LRRC41Q15345 812 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 GLIS3Q8NEA6 775 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 KANSL2Q9H9L4 492 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 MCM9Q9NXL9 1143 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 HEXIM1O94992 359 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 IL6STP40189 918 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 CFAP58Q5T655 872 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 TANGO6Q9C0B7 1094 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 COL4A1P02462 1669 aa22.38■■□□□ 1.17
CACNA1A-243ENST00000637616 M0R2N6 131 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 PRDX5P30044 214 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 ARID5AQ03989 594 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 ALS2CLQ60I27 953 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 BRINP3Q76B58 766 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 OTUD6BQ8N6M0 293 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 YY1AP1Q9H869 796 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 TFCP2L1Q9NZI6 479 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 A0A1W2PQJ5 194 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 CDK17Q00537 523 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 KRT12Q99456 494 aa22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 CCDC47Q96A33 483 aaKnown RBP22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 FAM84BQ96KN1 310 aaPredicted RBP22.37■■□□□ 1.17
CACNA1A-243ENST00000637616 NUP98P52948 1817 aa22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 LSP1P33241 339 aa22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 RNF187Q5TA31 235 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 CACNA2D4Q7Z3S7 1137 aa22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 NSUN4Q96CB9 384 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 ORC4O43929 436 aa22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 HPDP32754 393 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 SKOR1P84550 965 aa22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 CAVIN4Q5BKX8 364 aa22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 NCAPGQ9BPX3 1015 aa22.36■■□□□ 1.17
CACNA1A-243ENST00000637616 EPB41P11171 864 aaKnown RBP22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 PRLRP16471 622 aa22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 IBSPP21815 317 aaPredicted RBP22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 PAXIP1Q6ZW49 1069 aaPredicted RBP22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 ZNF572Q7Z3I7 529 aaPredicted RBP22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 FIGNQ5HY92 759 aa22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 PIK3R5Q8WYR1 880 aa22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 CAVIN3Q969G5 261 aa22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 STX8Q9UNK0 236 aa22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 ZNF804BA4D1E1 1349 aa22.35■■□□□ 1.17
CACNA1A-243ENST00000637616 PALMO75781 387 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 KIAA0754O94854 1291 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 TXKP42681 527 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 DNAAF5Q86Y56 855 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 NOX5Q96PH1 765 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 VAT1LQ9HCJ6 419 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 GEMIN8Q9NWZ8 242 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 MAD2L2Q9UI95 211 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 CFAP221Q4G0U5 840 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 KLHL7Q8IXQ5 586 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 IFT20Q8IY31 132 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 IQCKQ8N0W5 287 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 SLC44A5Q8NCS7 719 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 BAP1Q92560 729 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 MYL1P05976 194 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 OR52Z1P0C646 297 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 HNRNPH3P31942 346 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 ITIH3Q06033 890 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 NAA35Q5VZE5 725 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 CASKIN2Q8WXE0 1202 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 C7orf25Q9BPX7 421 aa22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 MMTAG2Q9BU76 263 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 CRNKL1Q9BZJ0 848 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-243ENST00000637616 STXBP3O00186 592 aa22.33■■□□□ 1.17
CACNA1A-243ENST00000637616 EHHADHQ08426 723 aa22.33■■□□□ 1.17
CACNA1A-243ENST00000637616 MAATS1Q7Z4T9 603 aa22.33■■□□□ 1.17
CACNA1A-243ENST00000637616 OR2W6PQ8NHA6 318 aa22.33■■□□□ 1.17
CACNA1A-243ENST00000637616 MYMKA6NI61 221 aa22.33■■□□□ 1.16
CACNA1A-243ENST00000637616 POTEDQ86YR6 584 aa22.33■■□□□ 1.16
CACNA1A-243ENST00000637616 UIMC1Q96RL1 719 aa22.33■■□□□ 1.16
CACNA1A-243ENST00000637616 MYCBPQ99417 103 aaPredicted RBP22.33■■□□□ 1.16
CACNA1A-243ENST00000637616 GOLPH3Q9H4A6 298 aa22.33■■□□□ 1.16
CACNA1A-243ENST00000637616 LRP5O75197 1615 aa22.33■■□□□ 1.16
CACNA1A-243ENST00000637616 SHANK3Q9BYB0 1731 aa22.33■■□□□ 1.16
CACNA1A-243ENST00000637616 BACH1O14867 736 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms