RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 TSPYL2Q9H2G4 693 aaPredicted RBP20.96■□□□□ 0.95
CIITA-215ENST00000637439 SCN10AQ9Y5Y9 1956 aa20.96■□□□□ 0.95
CIITA-215ENST00000637439 PITPNM1O00562 1244 aa20.95■□□□□ 0.94
CIITA-215ENST00000637439 TXNP10599 105 aaKnown RBP20.95■□□□□ 0.94
CIITA-215ENST00000637439 RABGGTBP53611 331 aa20.95■□□□□ 0.94
CIITA-215ENST00000637439 TTLL4Q14679 1199 aa20.95■□□□□ 0.94
CIITA-215ENST00000637439 CCDC85BQ15834 202 aaPredicted RBP20.95■□□□□ 0.94
CIITA-215ENST00000637439 DGKHQ86XP1 1220 aa20.95■□□□□ 0.94
CIITA-215ENST00000637439 RETREG2Q8NC44 543 aa20.95■□□□□ 0.94
CIITA-215ENST00000637439 VWCEQ96DN2 955 aa20.95■□□□□ 0.94
CIITA-215ENST00000637439 CRBNQ96SW2 442 aa20.95■□□□□ 0.94
CIITA-215ENST00000637439 ZNF213O14771 459 aa20.94■□□□□ 0.94
CIITA-215ENST00000637439 DEFB128Q7Z7B8 93 aa20.94■□□□□ 0.94
CIITA-215ENST00000637439 TBC1D10CQ8IV04 446 aa20.94■□□□□ 0.94
CIITA-215ENST00000637439 IL27Q8NEV9 243 aa20.94■□□□□ 0.94
CIITA-215ENST00000637439 RILPL2Q969X0 211 aa20.94■□□□□ 0.94
CIITA-215ENST00000637439 CHD7Q9P2D1 2997 aa20.94■□□□□ 0.94
CIITA-215ENST00000637439 BFSP2Q13515 415 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 AAMPQ13685 434 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 USH1GQ495M9 461 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 TMEM67Q5HYA8 995 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 IQCA1Q86XH1 822 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 PHOSPHO2Q8TCD6 241 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 SLC9A7Q96T83 725 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 NOD1Q9Y239 953 aa20.93■□□□□ 0.94
CIITA-215ENST00000637439 COPS5Q92905 334 aa20.92■□□□□ 0.94
CIITA-215ENST00000637439 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
CIITA-215ENST00000637439 ABCB11O95342 1321 aa20.92■□□□□ 0.94
CIITA-215ENST00000637439 MUC3AQ02505 3323 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 IQCF3P0C7M6 154 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 GOLGA8HP0CJ92 632 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 MYOGP15173 224 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 SDSP20132 328 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 NEDD4P46934 1319 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 MCF2L2Q86YR7 1114 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 CCDC155Q8N6L0 562 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 PNMA1Q8ND90 353 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 NSUN6Q8TEA1 469 aaKnown RBP20.91■□□□□ 0.94
CIITA-215ENST00000637439 ZKSCAN3Q9BRR0 538 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 UBA5Q9GZZ9 404 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 KAT14Q9H8E8 782 aa20.91■□□□□ 0.94
CIITA-215ENST00000637439 SCN5AQ14524 2016 aa20.9■□□□□ 0.94
CIITA-215ENST00000637439 CDC37Q16543 378 aaPredicted RBP20.9■□□□□ 0.94
CIITA-215ENST00000637439 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
CIITA-215ENST00000637439 CCDC62Q6P9F0 684 aa20.9■□□□□ 0.94
CIITA-215ENST00000637439 ADAMTS19Q8TE59 1207 aa20.9■□□□□ 0.94
CIITA-215ENST00000637439 IWS1Q96ST2 819 aa20.9■□□□□ 0.94
CIITA-215ENST00000637439 FTOQ9C0B1 505 aaKnown RBP eCLIP20.9■□□□□ 0.94
CIITA-215ENST00000637439 TANC1Q9C0D5 1861 aa20.9■□□□□ 0.94
CIITA-215ENST00000637439 TRANK1O15050 2925 aa20.89■□□□□ 0.94
CIITA-215ENST00000637439 KIF28PB7ZC32 967 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 GTPBP6O43824 516 aaPredicted RBP20.89■□□□□ 0.93
CIITA-215ENST00000637439 BAIAP3O94812 1187 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 ARIH2O95376 493 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 GH1P01241 217 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 CA3P07451 260 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 STXBP2Q15833 593 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 AAK1Q2M2I8 961 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 ADGRF4Q8IZF3 695 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 CAGE1Q8TC20 777 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 ANKS1AQ92625 1134 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 LAMA4Q16363 1823 aa20.89■□□□□ 0.93
CIITA-215ENST00000637439 KDM4AO75164 1064 aa20.88■□□□□ 0.93
CIITA-215ENST00000637439 POU3F3P20264 500 aaPredicted RBP20.88■□□□□ 0.93
CIITA-215ENST00000637439 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
CIITA-215ENST00000637439 PTGISQ16647 500 aa20.88■□□□□ 0.93
CIITA-215ENST00000637439 SESTD1Q86VW0 696 aa20.88■□□□□ 0.93
CIITA-215ENST00000637439 SMC5Q8IY18 1101 aa20.88■□□□□ 0.93
CIITA-215ENST00000637439 MICALL1Q8N3F8 863 aa20.88■□□□□ 0.93
CIITA-215ENST00000637439 SYTL5Q8TDW5 730 aaPredicted RBP20.88■□□□□ 0.93
CIITA-215ENST00000637439 AFG1LQ8WV93 481 aa20.88■□□□□ 0.93
CIITA-215ENST00000637439 ZSCAN10Q96SZ4 725 aaPredicted RBP20.88■□□□□ 0.93
CIITA-215ENST00000637439 UHRF1Q96T88 793 aaPredicted RBP20.88■□□□□ 0.93
CIITA-215ENST00000637439 RWDD1Q9H446 243 aaPredicted RBP20.88■□□□□ 0.93
CIITA-215ENST00000637439 OSBPL3Q9H4L5 887 aa20.88■□□□□ 0.93
CIITA-215ENST00000637439 MRPL11Q9Y3B7 192 aaKnown RBP20.88■□□□□ 0.93
CIITA-215ENST00000637439 HIP1O00291 1037 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 MMP3P08254 477 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 CHMP4BP1P59074 171 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 SEPT14Q6ZU15 432 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 AFAP1L1Q8TED9 768 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 TAAR1Q96RJ0 339 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 RMDN3Q96TC7 470 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 CPVLQ9H3G5 476 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 DIAPH3Q9NSV4 1193 aa20.87■□□□□ 0.93
CIITA-215ENST00000637439 DHX16O60231 1041 aaKnown RBP20.86■□□□□ 0.93
CIITA-215ENST00000637439 PARNO95453 639 aaKnown RBP20.86■□□□□ 0.93
CIITA-215ENST00000637439 PARP1P09874 1014 aaKnown RBP20.86■□□□□ 0.93
CIITA-215ENST00000637439 ARHGAP1Q07960 439 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 IMMTQ16891 758 aaKnown RBP20.86■□□□□ 0.93
CIITA-215ENST00000637439 LY6KQ17RY6 165 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 CWC27Q6UX04 472 aaKnown RBP20.86■□□□□ 0.93
CIITA-215ENST00000637439 FBXO11Q86XK2 927 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 HERC6Q8IVU3 1022 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 PPP1R13LQ8WUF5 828 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 TBC1D5Q92609 795 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 CTNNA3Q9UI47 895 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 KIAA1217Q5T5P2 1943 aa20.86■□□□□ 0.93
CIITA-215ENST00000637439 B4E1Z4 1266 aa20.85■□□□□ 0.93
CIITA-215ENST00000637439 EIF3JO75822 258 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms