RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 C2orf69Q8N8R5 385 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 TEX13BQ9BXU2 312 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 RAVER2Q9HCJ3 691 aaKnown RBP17.4■□□□□ 0.38
CLN6-219ENST00000637329 ZNF214Q9UL59 606 aaPredicted RBP17.4■□□□□ 0.38
CLN6-219ENST00000637329 KCNH3Q9ULD8 1083 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 CFBP00751 764 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 CYP3A4P08684 503 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 CIITAP33076 1130 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 TXLNAP40222 546 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 GRIN1Q05586 938 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 GRM1Q13255 1194 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 TREML2Q5T2D2 321 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 GADL1Q6ZQY3 521 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 CLEC4DQ8WXI8 215 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 SLC10A4Q96EP9 437 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 TMEM60Q9H2L4 133 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 ZNF408Q9H9D4 720 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 DDX25Q9UHL0 483 aaKnown RBP17.39■□□□□ 0.37
CLN6-219ENST00000637329 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 FRMPD4Q14CM0 1322 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 TRPM7Q96QT4 1865 aa17.39■□□□□ 0.37
CLN6-219ENST00000637329 TBX3O15119 743 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 ZNF202O95125 648 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 TDP2O95551 362 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 ALAS1P13196 640 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
CLN6-219ENST00000637329 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
CLN6-219ENST00000637329 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLN6-219ENST00000637329 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
CLN6-219ENST00000637329 CALCRLQ16602 461 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 TMEM266Q2M3C6 531 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 CCDC34Q96HJ3 373 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 MTMR9Q96QG7 549 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
CLN6-219ENST00000637329 RAB34Q9BZG1 259 aa17.38■□□□□ 0.37
CLN6-219ENST00000637329 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 NFIBO00712 420 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 SLC37A4O43826 429 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 EDIL3O43854 480 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 CELF2O95319 508 aaKnown RBP17.37■□□□□ 0.37
CLN6-219ENST00000637329 ZBTB48P10074 688 aaPredicted RBP17.37■□□□□ 0.37
CLN6-219ENST00000637329 MOGSQ13724 837 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 Q4G0T1 1027 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 SNRNP48Q6IEG0 339 aaKnown RBP17.37■□□□□ 0.37
CLN6-219ENST00000637329 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 GTF3C2Q8WUA4 911 aaPredicted RBP17.37■□□□□ 0.37
CLN6-219ENST00000637329 SYMPKQ92797 1274 aaKnown RBP17.37■□□□□ 0.37
CLN6-219ENST00000637329 WNK4Q96J92 1243 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 MCOLN1Q9GZU1 580 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 RNF146Q9NTX7 359 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 HOOK1Q9UJC3 728 aaKnown RBP17.37■□□□□ 0.37
CLN6-219ENST00000637329 SLC45A1Q9Y2W3 748 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 RPTORQ8N122 1335 aa17.37■□□□□ 0.37
CLN6-219ENST00000637329 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 COPB2P35606 906 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 GJA5P36382 358 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 MAP2K2P36507 400 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 TMEM132BQ14DG7 1078 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 IL17AQ16552 155 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 KANK3Q6NY19 840 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 SLFN12Q8IYM2 578 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 IGSF22Q8N9C0 903 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 TSPY26PQ9H489 355 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 KCNMB3Q9NPA1 279 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 PNMA3Q9UL41 463 aa17.36■□□□□ 0.37
CLN6-219ENST00000637329 SLC26A4O43511 780 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 CCDC192P0DO97 292 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 CETPP11597 493 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 OSBPP22059 807 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 GTF2A2P52657 109 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 SETQ01105 290 aaPredicted RBP17.35■□□□□ 0.37
CLN6-219ENST00000637329 CAMK4Q16566 473 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 KRBA2Q6ZNG9 492 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 CHST13Q8NET6 341 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 FUCA2Q9BTY2 467 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 ACAD9Q9H845 621 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 FBXO40Q9UH90 709 aa17.35■□□□□ 0.37
CLN6-219ENST00000637329 TNRC18O15417 2968 aaPredicted RBP17.35■□□□□ 0.37
CLN6-219ENST00000637329 STAT3P40763 770 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 HERVK_113P62684 666 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 PDIA5Q14554 519 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 SPECC1Q5M775 1068 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLN6-219ENST00000637329 FCHSD1Q86WN1 690 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 RIOX2Q8IUF8 465 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 CNNM3Q8NE01 707 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 CCSER1Q9C0I3 900 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 ASCC2Q9H1I8 757 aaPredicted RBP17.34■□□□□ 0.37
CLN6-219ENST00000637329 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
CLN6-219ENST00000637329 POLR2DO15514 142 aaKnown RBP17.33■□□□□ 0.36
CLN6-219ENST00000637329 FMR1Q06787 632 aaKnown RBP eCLIP17.33■□□□□ 0.36
CLN6-219ENST00000637329 L1TD1Q5T7N2 865 aaKnown RBP17.33■□□□□ 0.36
CLN6-219ENST00000637329 GPAT2Q6NUI2 795 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 224.4 ms