RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 LHX8Q68G74 356 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 PPP1R18Q6NYC8 613 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 KCNV1Q6PIU1 500 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 SLC30A10Q6XR72 485 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 BICD2Q8TD16 824 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 MORC4Q8TE76 937 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 WASF1Q92558 559 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 HTATIP2Q9BUP3 242 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 SLC26A6Q9BXS9 759 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 C6orf50Q9HD87 102 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 XPNPEP3Q9NQH7 507 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 FAM217BQ9NTX9 383 aaPredicted RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 BARHL2Q9NY43 387 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 ZNF236Q9UL36 1845 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 SMCHD1A6NHR9 2005 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 NKRFO15226 690 aaKnown RBP eCLIP9.44□□□□□ -0.9
PNKP-226ENST00000636840 PFKFB2O60825 505 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 STAM2O75886 525 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 FARP2O94887 1054 aaPredicted RBP9.44□□□□□ -0.9
PNKP-226ENST00000636840 DEXIO95424 95 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 MYCLP12524 364 aaPredicted RBP9.44□□□□□ -0.9
PNKP-226ENST00000636840 EIF2AK2P19525 551 aaKnown RBP9.44□□□□□ -0.9
PNKP-226ENST00000636840 CCND2P30279 289 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 HOXA13P31271 388 aaPredicted RBP9.44□□□□□ -0.9
PNKP-226ENST00000636840 ADCY7P51828 1080 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 TTLL4Q14679 1199 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 XRRA1Q6P2D8 792 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 EEPD1Q7L9B9 569 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 FAM177A1Q8N128 213 aaPredicted RBP9.44□□□□□ -0.9
PNKP-226ENST00000636840 PCSK9Q8NBP7 692 aaKnown RBP9.44□□□□□ -0.9
PNKP-226ENST00000636840 TRPV1Q8NER1 839 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 SCFD2Q8WU76 684 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 PHKBQ93100 1093 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 BACH2Q9BYV9 841 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 WDR11Q9BZH6 1224 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 NCOA5Q9HCD5 579 aaKnown RBP9.44□□□□□ -0.9
PNKP-226ENST00000636840 SH3GLB2Q9NR46 395 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 PXMP2Q9NR77 195 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 LIMCH1Q9UPQ0 1083 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 Q9Y3F1 56 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 CNTNAP5Q8WYK1 1306 aa9.44□□□□□ -0.9
PNKP-226ENST00000636840 NID2Q14112 1375 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 DYNC1LI2O43237 492 aaPredicted RBP9.43□□□□□ -0.9
PNKP-226ENST00000636840 TXNP10599 105 aaKnown RBP9.43□□□□□ -0.9
PNKP-226ENST00000636840 EDNRBP24530 442 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 MCM2P49736 904 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 NLRP5P59047 1200 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 FUT2Q10981 343 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 GNPTABQ3T906 1256 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 GNASQ5JWF2 1037 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 ANO1Q5XXA6 986 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 WWC2Q6AWC2 1192 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 NLRX1Q86UT6 975 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 VSIG10LQ86VR7 867 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 DPF3Q92784 378 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
PNKP-226ENST00000636840 VTI1AQ96AJ9 217 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 PAWRQ96IZ0 340 aaKnown RBP9.43□□□□□ -0.9
PNKP-226ENST00000636840 FGD4Q96M96 766 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 PURBQ96QR8 312 aaKnown RBP9.43□□□□□ -0.9
PNKP-226ENST00000636840 PDCD2LQ9BRP1 358 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
PNKP-226ENST00000636840 C11orf49Q9H6J7 331 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 RIC8AQ9NPQ8 531 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 SH2B1Q9NRF2 756 aaPredicted RBP9.43□□□□□ -0.9
PNKP-226ENST00000636840 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
PNKP-226ENST00000636840 PLXNA1Q9UIW2 1896 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 RBM47A0AV96 593 aaKnown RBP9.42□□□□□ -0.9
PNKP-226ENST00000636840 STXBP3O00186 592 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 DNM1LO00429 736 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 MEIS2O14770 477 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 OPLAHO14841 1288 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 C6orf222P0C671 652 aaPredicted RBP9.42□□□□□ -0.9
PNKP-226ENST00000636840 TGFB3P10600 412 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 ZNF76P36508 570 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 ADCYAP1R1P41586 468 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 AP3B2Q13367 1082 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 PGM5Q15124 567 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 LRRC41Q15345 812 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 NTRK3Q16288 839 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 DUSP28Q4G0W2 176 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 GJC2Q5T442 439 aaPredicted RBP9.42□□□□□ -0.9
PNKP-226ENST00000636840 GALNT17Q6IS24 598 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 TAPT1Q6NXT6 567 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 SEPT14Q6ZU15 432 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 FBXO16Q8IX29 292 aaPredicted RBP9.42□□□□□ -0.9
PNKP-226ENST00000636840 CDHR1Q96JP9 859 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 PCDHA6Q9UN73 950 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 NR2E3Q9Y5X4 410 aa9.42□□□□□ -0.9
PNKP-226ENST00000636840 ESYT2A0FGR8 921 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 MAFGO15525 162 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 KPNA6O60684 536 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 CABYRO75952 493 aa9.41□□□□□ -0.9
PNKP-226ENST00000636840 PGK1P00558 417 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms