RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 GPAT2Q6NUI2 795 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 TRIM46Q7Z4K8 759 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 CCDC84Q86UT8 332 aaPredicted RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 SHCBP1Q8NEM2 672 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 CCDC148Q8NFR7 591 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 CCDC12Q8WUD4 166 aaPredicted RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 RRP36Q96EU6 259 aaKnown RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 TMX3Q96JJ7 454 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 SLC38A10Q9HBR0 1119 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 SH3GLB2Q9NR46 395 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 MAP3K20Q9NYL2 800 aaKnown RBP7.77□□□□□ -1.17
UPF3B-205ENST00000636792 MORF4L1Q9UBU8 362 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 RABGAP1Q9Y3P9 1069 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 PLXNB2O15031 1838 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 ADGRA2Q96PE1 1338 aa7.77□□□□□ -1.17
UPF3B-205ENST00000636792 PNMA6FA0A0J9YX94 578 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ESYT2A0FGR8 921 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 PDHXO00330 501 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 VWA5AO00534 786 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ZBTB5O15062 677 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 PRPF3O43395 683 aaKnown RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 TLR2O60603 784 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ZBED4O75132 1171 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 SLC25A27O95847 323 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ICAM1P05362 532 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 PDCP20941 246 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 CCNA1P78396 465 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 AKAP17AQ02040 695 aaKnown RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 KIF23Q02241 960 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 GHRHRQ02643 423 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 TAF1CQ15572 869 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 NTRK3Q16288 839 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 TREML2Q5T2D2 321 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ADGRF4Q8IZF3 695 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 SPICE1Q8N0Z3 855 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 SMARCC2Q8TAQ2 1214 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 SMCR8Q8TEV9 937 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 AMNQ9BXJ7 453 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 TEX13BQ9BXU2 312 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ASCC2Q9H1I8 757 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ZFYVE28Q9HCC9 887 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 FAM217BQ9NTX9 383 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 FBXO40Q9UH90 709 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 PRR12Q9ULL5 1215 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 CTDP1Q9Y5B0 961 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 ABCB11O95342 1321 aa7.76□□□□□ -1.17
UPF3B-205ENST00000636792 FRMPD2Q68DX3 1309 aaPredicted RBP7.76□□□□□ -1.17
UPF3B-205ENST00000636792 LOC102724159A0A0B4J2E5 919 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 IGF2BP3O00425 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 RAD21O60216 631 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 SCG2P13521 617 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 JUNDP17535 347 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 CDC27P30260 824 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 SSRP1Q08945 709 aaKnown RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 PWP2Q15269 919 aaKnown RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 CDC37Q16543 378 aaPredicted RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 PFKFB3Q16875 520 aaPredicted RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 KIAA1755Q5JYT7 1200 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 GALNT17Q6IS24 598 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 KCTD1Q719H9 257 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 NBPF11Q86T75 865 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 SRBD1Q8N5C6 995 aaKnown RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 NSUN7Q8NE18 718 aaKnown RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 CHST13Q8NET6 341 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 REPS2Q8NFH8 660 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 MYL10Q9BUA6 226 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 ZNF214Q9UL59 606 aaPredicted RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 ISY1Q9ULR0 285 aaKnown RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 NAP1L2Q9ULW6 460 aaPredicted RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 BAZ2BQ9UIF8 2168 aaKnown RBP7.75□□□□□ -1.17
UPF3B-205ENST00000636792 PLXNA1Q9UIW2 1896 aa7.75□□□□□ -1.17
UPF3B-205ENST00000636792 MYH15Q9Y2K3 1946 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 PTPDC1A2A3K4 754 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 SIAH2O43255 324 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 CYTH3O43739 400 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 PLEKHA8P1O95397 391 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 LARGE1O95461 756 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 GNRH1P01148 92 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 HSP90AA1P07900 732 aaKnown RBP7.74□□□□□ -1.17
UPF3B-205ENST00000636792 RXRAP19793 462 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 CALML3P27482 149 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 MAPK4P31152 587 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 ADD1P35611 737 aaKnown RBP7.74□□□□□ -1.17
UPF3B-205ENST00000636792 ERVK-9P63128 1117 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 ERVK-24P63145 666 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 FBXO11Q86XK2 927 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 RIOX2Q8IUF8 465 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 CCDC83Q8IWF9 413 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 ABRAQ8N0Z2 381 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 FAM43AQ8N2R8 423 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 JMYQ8N9B5 988 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 BICD2Q8TD16 824 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 ATG4CQ96DT6 458 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 NUP88Q99567 741 aaPredicted RBP7.74□□□□□ -1.17
UPF3B-205ENST00000636792 PTPN18Q99952 460 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 BEGAINQ9BUH8 593 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 MROH8Q9H579 483 aa7.74□□□□□ -1.17
UPF3B-205ENST00000636792 JMJD4Q9H9V9 463 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms