RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CALCRLQ16602 461 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 MFSD14BQ5SR56 506 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 TTBK2Q6IQ55 1244 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 SV2BQ7L1I2 683 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 EXOC4Q96A65 974 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 MS4A14Q96JA4 679 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 EHD4Q9H223 541 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 SALL4Q9UJQ4 1053 aa15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 PACSIN2Q9UNF0 486 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-228ENST00000636610 NPHP3-ACAD11A0A0J9YXS1 232 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 ZBED6P86452 979 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 KCNB1Q14721 858 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 TMED8Q6PL24 325 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 PROCA1Q8NCQ7 364 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 SNX29Q8TEQ0 813 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 FGFBP2Q9BYJ0 223 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 TMEM51Q9NW97 253 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 ARAP2Q8WZ64 1704 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 C6orf229H3BNL8 230 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 RFC4P35249 363 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 ACTN2P35609 894 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 CACNA2D4Q7Z3S7 1137 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 LRRC1Q9BTT6 524 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 NDST4Q9H3R1 872 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 NARFQ9UHQ1 456 aa15.61■□□□□ 0.09
CACNA1A-228ENST00000636610 A0A1W2PQC6 194 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 ESYT3A0FGR9 886 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 MPHOSPH10O00566 681 aaKnown RBP15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 GRB10Q13322 594 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 WDR66Q8TBY9 1149 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 DHTKD1Q96HY7 919 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 TTYH3Q9C0H2 523 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 ZMYND12Q9H0C1 365 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 SH3GLB2Q9NR46 395 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 MYO1AQ9UBC5 1043 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 NHSL1Q5SYE7 1610 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 TAL1P17542 331 aaPredicted RBP15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 KIF11P52732 1056 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 SNAP25P60880 206 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 GPSM2P81274 684 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 ECM1Q16610 540 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 SND1Q7KZF4 910 aaKnown RBP eCLIP15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 BLOC1S4Q9NUP1 217 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 BICDL2A1A5D9 508 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 KCTD1Q719H9 257 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 KRT25Q7Z3Z0 450 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 GOLGA6L1Q8N7Z2 621 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 DDX12PQ92771 950 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 PCDHA13Q9Y5I0 950 aa15.6■□□□□ 0.09
CACNA1A-228ENST00000636610 ZSCAN5CA6NGD5 496 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 GNA11P29992 359 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 DPP8Q6V1X1 898 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 LARP4BQ92615 738 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 SELENOOQ9BVL4 669 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 GBP3Q9H0R5 595 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 KDM4FA0A1W2PPD8 638 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 TRAF5O00463 557 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 SYF2O95926 243 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 SCNN1DP51172 638 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 SLC10A5Q5PT55 438 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 CCDC181Q5TID7 509 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 PNMA5Q96PV4 448 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 RTFDC1Q9BY42 306 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 GOLPH3Q9H4A6 298 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 HPCAL4Q9UM19 191 aa15.59■□□□□ 0.09
CACNA1A-228ENST00000636610 SPATA31A5Q5VU36 1347 aa15.58■□□□□ 0.09
CACNA1A-228ENST00000636610 SPATA31A7Q8IWB4 1347 aa15.58■□□□□ 0.09
CACNA1A-228ENST00000636610 MYO1CO00159 1063 aa15.58■□□□□ 0.09
CACNA1A-228ENST00000636610 SLC1A4P43007 532 aa15.58■□□□□ 0.09
CACNA1A-228ENST00000636610 CNNM4Q6P4Q7 775 aa15.58■□□□□ 0.09
CACNA1A-228ENST00000636610 FTCDO95954 541 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 MAGEA1P43355 309 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 GTF2IP78347 998 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 MEA1Q16626 185 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 VWA3BQ502W6 1294 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 ZNF804AQ7Z570 1209 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 CNBD1Q8NA66 436 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 A0A1B0GUL6 1792 aa15.58■□□□□ 0.08
CACNA1A-228ENST00000636610 E9PMD0 336 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 AKR1B1P15121 316 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 VAV2P52735 878 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 AMPD3Q01432 767 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 CCDC40Q4G0X9 1142 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 PAPD7Q5XG87 772 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 CD209Q9NNX6 404 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 EIF3CLB5ME19 914 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L15C9J2P7 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L13C9JLJ4 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L11C9JVI0 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L18D6R9N7 530 aa15.57■□□□□ 0.08
CACNA1A-228ENST00000636610 USP17L22D6RA61 530 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms