RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 KIAA1211Q6ZU35 1233 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 LRRC47Q8N1G4 583 aaKnown RBP8.68□□□□□ -1.02
CIITA-214ENST00000636238 SCFD2Q8WU76 684 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 CEP95Q96GE4 821 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 RAD9AQ99638 391 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 NACAP1Q9BZK3 213 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 FTOQ9C0B1 505 aaKnown RBP eCLIP8.68□□□□□ -1.02
CIITA-214ENST00000636238 ANO2Q9NQ90 1003 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 HOMER2Q9NSB8 354 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 TRMT13Q9NUP7 481 aaKnown RBP8.68□□□□□ -1.02
CIITA-214ENST00000636238 PARP14Q460N5 1801 aa8.68□□□□□ -1.02
CIITA-214ENST00000636238 A0A0D9SFI3 127 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 HIP1O00291 1037 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 SGSM2O43147 1006 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 DCXO43602 365 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 REC8O95072 547 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 GJB5O95377 273 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 ICAM1P05362 532 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 TSPY3P0CV98 308 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 TSPY8P0CW00 308 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 CYP2C9P11712 490 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 SELPP16109 830 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 SLC4A3P48751 1232 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 MRE11P49959 708 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 WDR5P61964 334 aaKnown RBP8.67□□□□□ -1.02
CIITA-214ENST00000636238 PPP2R5BQ15173 497 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 LAMA4Q16363 1823 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 PTPROQ16827 1216 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 CSPP1Q1MSJ5 1256 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 NBPF20Q3BBV1 942 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 TIGD5Q53EQ6 642 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 CNKSR3Q6P9H4 555 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 DEFB128Q7Z7B8 93 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 ALYREFQ86V81 257 aaKnown RBP8.67□□□□□ -1.02
CIITA-214ENST00000636238 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
CIITA-214ENST00000636238 KBTBD3Q8NAB2 608 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 DNERQ8NFT8 737 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 APPBP2Q92624 585 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 SEC62Q99442 399 aaKnown RBP8.67□□□□□ -1.02
CIITA-214ENST00000636238 PRRX2Q99811 253 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 WDR11Q9BZH6 1224 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 UPF3BQ9BZI7 483 aaKnown RBP8.67□□□□□ -1.02
CIITA-214ENST00000636238 PUS7LQ9H0K6 701 aaKnown RBP8.67□□□□□ -1.02
CIITA-214ENST00000636238 PDGFCQ9NRA1 345 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 PLXNA1Q9UIW2 1896 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 NOD1Q9Y239 953 aa8.67□□□□□ -1.02
CIITA-214ENST00000636238 PRRC2BQ5JSZ5 2229 aaKnown RBP8.66□□□□□ -1.02
CIITA-214ENST00000636238 GREB1LQ9C091 1923 aaPredicted RBP8.66□□□□□ -1.02
CIITA-214ENST00000636238 POTEB3A0JP26 581 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 GRXCR2A6NFK2 248 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 RFXAPO00287 272 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 MYL3P08590 195 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 ALAS1P13196 640 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 EDNRBP24530 442 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 NOVP48745 357 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 RBM25P49756 843 aaKnown RBP8.66□□□□□ -1.02
CIITA-214ENST00000636238 ALDH5A1P51649 535 aaPredicted RBP8.66□□□□□ -1.02
CIITA-214ENST00000636238 PTH1RQ03431 593 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 IKQ13123 557 aaPredicted RBP8.66□□□□□ -1.02
CIITA-214ENST00000636238 COL19A1Q14993 1142 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 POTEBQ6S5H4 581 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 BTNL9Q6UXG8 535 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 OR6J1Q8NGC5 347 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 NEK9Q8TD19 979 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 RUFY2Q8WXA3 655 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 MFSD14AQ96MC6 490 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 ZBED2Q9BTP6 218 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 LSG1Q9H089 658 aaKnown RBP8.66□□□□□ -1.02
CIITA-214ENST00000636238 CCPG1Q9ULG6 757 aa8.66□□□□□ -1.02
CIITA-214ENST00000636238 EMSYQ7Z589 1322 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 WDR19Q8NEZ3 1342 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 MINDY4BA8MYZ0 360 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.02
CIITA-214ENST00000636238 RNF113AO15541 343 aaKnown RBP8.65□□□□□ -1.02
CIITA-214ENST00000636238 EIF5BO60841 1220 aaKnown RBP8.65□□□□□ -1.02
CIITA-214ENST00000636238 TDO2P48775 406 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 NT5C2P49902 561 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 FOXK2Q01167 660 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 NHLH1Q02575 133 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 IKBKEQ14164 716 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 NSMFQ6X4W1 530 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 LRRC8DQ7L1W4 858 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 DCAF4Q8WV16 495 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 KHSRPQ92945 711 aaKnown RBP eCLIP8.65□□□□□ -1.02
CIITA-214ENST00000636238 MRPL38Q96DV4 380 aaKnown RBP8.65□□□□□ -1.02
CIITA-214ENST00000636238 SNX27Q96L92 541 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 IPO9Q96P70 1041 aaKnown RBP8.65□□□□□ -1.02
CIITA-214ENST00000636238 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.02
CIITA-214ENST00000636238 KIF2CQ99661 725 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 RANBP17Q9H2T7 1088 aaKnown RBP8.65□□□□□ -1.02
CIITA-214ENST00000636238 CERS4Q9HA82 394 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 SUGCTQ9HAC7 445 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 CD320Q9NPF0 282 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 PRR12Q9ULL5 1215 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 INSL6Q9Y581 213 aa8.65□□□□□ -1.02
CIITA-214ENST00000636238 LRRC37A2A6NM11 1700 aa8.65□□□□□ -1.03
CIITA-214ENST00000636238 MYO9BQ13459 2157 aa8.65□□□□□ -1.03
CIITA-214ENST00000636238 LINC01553A4QN01 128 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms