RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 IKQ13123 557 aaPredicted RBP21.61■■□□□ 1.05
CLN6-212ENST00000636020 COL19A1Q14993 1142 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 GIMAP6Q6P9H5 292 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 LRRC8DQ7L1W4 858 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 CRBNQ96SW2 442 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 HAUS7Q99871 368 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 ADD3Q9UEY8 706 aaKnown RBP21.61■■□□□ 1.05
CLN6-212ENST00000636020 ISY1Q9ULR0 285 aaKnown RBP21.61■■□□□ 1.05
CLN6-212ENST00000636020 ZDBF2Q9HCK1 2354 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 TECTAO75443 2155 aa21.61■■□□□ 1.05
CLN6-212ENST00000636020 RAD50Q92878 1312 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 LOC102724159A0A0B4J2E5 919 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 NKRFO15226 690 aaKnown RBP eCLIP21.6■■□□□ 1.05
CLN6-212ENST00000636020 NBNO60934 754 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 PRDM1O75626 825 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 IRS1P35568 1242 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 PWP2Q15269 919 aaKnown RBP21.6■■□□□ 1.05
CLN6-212ENST00000636020 FAM117BQ6P1L5 589 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 ITPRIPQ8IWB1 547 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 KIF1BPQ96EK5 621 aa21.6■■□□□ 1.05
CLN6-212ENST00000636020 EFCAB14O75071 495 aa21.59■■□□□ 1.05
CLN6-212ENST00000636020 RBL2Q08999 1139 aa21.59■■□□□ 1.05
CLN6-212ENST00000636020 BAATQ14032 418 aaPredicted RBP21.59■■□□□ 1.05
CLN6-212ENST00000636020 PTPROQ16827 1216 aa21.59■■□□□ 1.05
CLN6-212ENST00000636020 GDF6Q6KF10 455 aaPredicted RBP21.59■■□□□ 1.05
CLN6-212ENST00000636020 DHX38Q92620 1227 aaKnown RBP21.59■■□□□ 1.05
CLN6-212ENST00000636020 COPS5Q92905 334 aa21.59■■□□□ 1.05
CLN6-212ENST00000636020 INSL6Q9Y581 213 aa21.59■■□□□ 1.05
CLN6-212ENST00000636020 RLBP1P12271 317 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 MCCP23508 829 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 SLC1A4P43007 532 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 PTPN5P54829 565 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 IKBKEQ14164 716 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 PPP2R5BQ15173 497 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 TIGD5Q53EQ6 642 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 HERC4Q5GLZ8 1057 aaPredicted RBP21.58■■□□□ 1.05
CLN6-212ENST00000636020 ZSCAN25Q6NSZ9 544 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 SESTD1Q86VW0 696 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 BANK1Q8NDB2 785 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 NEDD1Q8NHV4 660 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 ZNF287Q9HBT7 754 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 CCPG1Q9ULG6 757 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 PRR12Q9ULL5 1215 aa21.58■■□□□ 1.05
CLN6-212ENST00000636020 MYH7P12883 1935 aa21.58■■□□□ 1.04
CLN6-212ENST00000636020 TCEAL5Q5H9L2 206 aa21.57■■□□□ 1.04
CLN6-212ENST00000636020 IER5LQ5T953 404 aa21.57■■□□□ 1.04
CLN6-212ENST00000636020 BMP8AQ7Z5Y6 402 aa21.57■■□□□ 1.04
CLN6-212ENST00000636020 FTSJ3Q8IY81 847 aaKnown RBP21.57■■□□□ 1.04
CLN6-212ENST00000636020 CHMP4CQ96CF2 233 aa21.57■■□□□ 1.04
CLN6-212ENST00000636020 PLIN4Q96Q06 1357 aa21.57■■□□□ 1.04
CLN6-212ENST00000636020 MYO7AQ13402 2215 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 CKBP12277 381 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 CHMP4BP1P59074 171 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 FOXK2Q01167 660 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 RCSD1Q6JBY9 416 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 EP400NLQ6ZTU2 488 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 KCTD1Q719H9 257 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 SP7Q8TDD2 431 aaPredicted RBP21.56■■□□□ 1.04
CLN6-212ENST00000636020 SCFD2Q8WU76 684 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 MUTYHQ9UIF7 546 aa21.56■■□□□ 1.04
CLN6-212ENST00000636020 RBAK-RBAKDNI3L0D1 243 aa21.55■■□□□ 1.04
CLN6-212ENST00000636020 ICAM1P05362 532 aa21.55■■□□□ 1.04
CLN6-212ENST00000636020 HTRA4P83105 476 aaPredicted RBP21.55■■□□□ 1.04
CLN6-212ENST00000636020 EPC2Q52LR7 807 aa21.55■■□□□ 1.04
CLN6-212ENST00000636020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.55■■□□□ 1.04
CLN6-212ENST00000636020 SAMD11Q96NU1 681 aa21.55■■□□□ 1.04
CLN6-212ENST00000636020 BCL11AQ9H165 835 aa21.55■■□□□ 1.04
CLN6-212ENST00000636020 EPB41L4AQ9HCS5 686 aaPredicted RBP21.55■■□□□ 1.04
CLN6-212ENST00000636020 ZFHX2Q9C0A1 2572 aaPredicted RBP21.54■■□□□ 1.04
CLN6-212ENST00000636020 H3BNC9 293 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 NFIBO00712 420 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 TSPY3P0CV98 308 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 TSPY8P0CW00 308 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 LTBRP36941 435 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 TRAF7Q6Q0C0 670 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 RNF135Q8IUD6 432 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 EDAQ92838 391 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 PRRX2Q99811 253 aa21.54■■□□□ 1.04
CLN6-212ENST00000636020 TXNP10599 105 aaKnown RBP21.53■■□□□ 1.04
CLN6-212ENST00000636020 EDNRBP24530 442 aa21.53■■□□□ 1.04
CLN6-212ENST00000636020 PDE4DQ08499 809 aa21.53■■□□□ 1.04
CLN6-212ENST00000636020 TCF15Q12870 199 aa21.53■■□□□ 1.04
CLN6-212ENST00000636020 SMAD2Q15796 467 aaKnown RBP21.53■■□□□ 1.04
CLN6-212ENST00000636020 NSUN3Q9H649 340 aaKnown RBP21.53■■□□□ 1.04
CLN6-212ENST00000636020 CLDND1Q9NY35 253 aa21.53■■□□□ 1.04
CLN6-212ENST00000636020 CACNA1AO00555 2505 aa21.53■■□□□ 1.04
CLN6-212ENST00000636020 SPTBN4Q9H254 2564 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 CACNA1HO95180 2353 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 PTPDC1A2A3K4 754 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 TFAP4Q01664 338 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 MKRN4PQ13434 485 aaPredicted RBP21.52■■□□□ 1.04
CLN6-212ENST00000636020 GPM6BQ13491 265 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 MBTPS1Q14703 1052 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 KAT2BQ92831 832 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 OSBP2Q969R2 916 aa21.52■■□□□ 1.04
CLN6-212ENST00000636020 POP1Q99575 1024 aaKnown RBP21.52■■□□□ 1.04
CLN6-212ENST00000636020 PTPRZ1P23471 2315 aaPredicted RBP21.51■■□□□ 1.03
CLN6-212ENST00000636020 GFRA3O60609 400 aa21.51■■□□□ 1.03
CLN6-212ENST00000636020 ARIH2O95376 493 aa21.51■■□□□ 1.03
CLN6-212ENST00000636020 TRIM71Q2Q1W2 868 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms