RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 RTN1Q16799 776 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 Q6ZUG5 572 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 GLT1D1Q96MS3 346 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 STARD7Q9NQZ5 370 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 COL20A1Q9P218 1284 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 GNEQ9Y223 722 aaKnown RBP18.14■□□□□ 0.49
LINC00339-207ENST00000634712 LCTP09848 1927 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 MYADML2A6NDP7 307 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 GOLGA8AA7E2F4 631 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 GOLGA8BA8MQT2 603 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 EIF5BO60841 1220 aaKnown RBP18.13■□□□□ 0.49
LINC00339-207ENST00000634712 ASGR1P07306 291 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 SYN1P17600 705 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 EIF2AK2P19525 551 aaKnown RBP18.13■□□□□ 0.49
LINC00339-207ENST00000634712 HOXA13P31271 388 aaPredicted RBP18.13■□□□□ 0.49
LINC00339-207ENST00000634712 DUSP28Q4G0W2 176 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 CHRDL2Q6WN34 429 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 TMTC3Q6ZXV5 915 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 CUL5Q93034 780 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 PXMP2Q9NR77 195 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 BRPF3Q9ULD4 1205 aa18.13■□□□□ 0.49
LINC00339-207ENST00000634712 ALPK3Q96L96 1907 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 RBM47A0AV96 593 aaKnown RBP18.12■□□□□ 0.49
LINC00339-207ENST00000634712 OPLAHO14841 1288 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 RPS6KB1P23443 525 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 BEX3Q00994 111 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 GHRHRQ02643 423 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 TTLL4Q14679 1199 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 PPP2R5BQ15173 497 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 FSCN1Q16658 493 aaKnown RBP18.12■□□□□ 0.49
LINC00339-207ENST00000634712 FCHSD1Q86WN1 690 aa18.12■□□□□ 0.49
LINC00339-207ENST00000634712 COLQQ9Y215 455 aaPredicted RBP18.12■□□□□ 0.49
LINC00339-207ENST00000634712 NKRFO15226 690 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00339-207ENST00000634712 NR3C2P08235 984 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 TXNP10599 105 aaKnown RBP18.11■□□□□ 0.49
LINC00339-207ENST00000634712 MYCLP12524 364 aaPredicted RBP18.11■□□□□ 0.49
LINC00339-207ENST00000634712 IRX5P78411 483 aaPredicted RBP18.11■□□□□ 0.49
LINC00339-207ENST00000634712 APOBRQ0VD83 1088 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 TRIM60Q495X7 471 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 BRDTQ58F21 947 aaPredicted RBP18.11■□□□□ 0.49
LINC00339-207ENST00000634712 C1orf53Q5VUE5 145 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 CCSAPQ6IQ19 270 aaPredicted RBP18.11■□□□□ 0.49
LINC00339-207ENST00000634712 SEPT14Q6ZU15 432 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 BRF1Q92994 677 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 DNAH12Q6ZR08 3092 aa18.11■□□□□ 0.49
LINC00339-207ENST00000634712 ELP1O95163 1332 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 hCG_1642624A0A1W2PR95 340 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 EIF3JO75822 258 aaKnown RBP18.1■□□□□ 0.49
LINC00339-207ENST00000634712 METAP2P50579 478 aaKnown RBP eCLIP18.1■□□□□ 0.49
LINC00339-207ENST00000634712 RCAN1P53805 252 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 NKX3-2P78367 333 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 SNX17Q15036 470 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 OR6J1Q8NGC5 347 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 CYP46A1Q9Y6A2 500 aa18.1■□□□□ 0.49
LINC00339-207ENST00000634712 CABYRO75952 493 aa18.09■□□□□ 0.49
LINC00339-207ENST00000634712 CPT1AP50416 773 aa18.09■□□□□ 0.49
LINC00339-207ENST00000634712 TMEM63BQ5T3F8 832 aa18.09■□□□□ 0.49
LINC00339-207ENST00000634712 RUFY3Q7L099 469 aa18.09■□□□□ 0.49
LINC00339-207ENST00000634712 HEATR3Q7Z4Q2 680 aa18.09■□□□□ 0.49
LINC00339-207ENST00000634712 LBHD1Q9BQE6 289 aaPredicted RBP18.09■□□□□ 0.49
LINC00339-207ENST00000634712 PDCD2LQ9BRP1 358 aa18.09■□□□□ 0.49
LINC00339-207ENST00000634712 PRDM5Q9NQX1 630 aaPredicted RBP18.09■□□□□ 0.49
LINC00339-207ENST00000634712 A0A0U1RQG5 324 aaPredicted RBP18.08■□□□□ 0.49
LINC00339-207ENST00000634712 CTAGE5O15320 804 aa18.08■□□□□ 0.49
LINC00339-207ENST00000634712 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.49
LINC00339-207ENST00000634712 PTGS1P23219 599 aa18.08■□□□□ 0.49
LINC00339-207ENST00000634712 CCND2P30279 289 aa18.08■□□□□ 0.49
LINC00339-207ENST00000634712 TLE2Q04725 743 aa18.08■□□□□ 0.49
LINC00339-207ENST00000634712 HABP4Q5JVS0 413 aaKnown RBP18.08■□□□□ 0.49
LINC00339-207ENST00000634712 FBXL16Q8N461 479 aa18.08■□□□□ 0.49
LINC00339-207ENST00000634712 PSTPIP2Q9H939 334 aa18.08■□□□□ 0.49
LINC00339-207ENST00000634712 ZSWIM6Q9HCJ5 1215 aa18.08■□□□□ 0.49
LINC00339-207ENST00000634712 V9GY48 417 aaPredicted RBP18.08■□□□□ 0.49
LINC00339-207ENST00000634712 LRRC37A2A6NM11 1700 aa18.08■□□□□ 0.48
LINC00339-207ENST00000634712 DCDC2CA8MYV0 355 aa18.07■□□□□ 0.48
LINC00339-207ENST00000634712 PGM5Q15124 567 aa18.07■□□□□ 0.48
LINC00339-207ENST00000634712 CXCL17Q6UXB2 119 aa18.07■□□□□ 0.48
LINC00339-207ENST00000634712 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
LINC00339-207ENST00000634712 POLR3EQ9NVU0 708 aa18.07■□□□□ 0.48
LINC00339-207ENST00000634712 RBM27Q9P2N5 1060 aaKnown RBP18.07■□□□□ 0.48
LINC00339-207ENST00000634712 MRVI1Q9Y6F6 885 aa18.07■□□□□ 0.48
LINC00339-207ENST00000634712 MROH7Q68CQ1 1323 aa18.07■□□□□ 0.48
LINC00339-207ENST00000634712 MYL3P08590 195 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 CDC27P30260 824 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
LINC00339-207ENST00000634712 MAGEA10P43363 369 aaPredicted RBP18.06■□□□□ 0.48
LINC00339-207ENST00000634712 LY6KQ17RY6 165 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 KCNV1Q6PIU1 500 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 USP17L6PQ6QN14 398 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 VSIG10LQ86VR7 867 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 COPS5Q92905 334 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 CNTNAP5Q8WYK1 1306 aa18.06■□□□□ 0.48
LINC00339-207ENST00000634712 ARVCFO00192 962 aa18.05■□□□□ 0.48
LINC00339-207ENST00000634712 PIK3CDO00329 1044 aa18.05■□□□□ 0.48
LINC00339-207ENST00000634712 ARIH2O95376 493 aa18.05■□□□□ 0.48
LINC00339-207ENST00000634712 GH1P01241 217 aa18.05■□□□□ 0.48
LINC00339-207ENST00000634712 CLTBP09497 229 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms