RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 RCAN1P53805 252 aa25.88■■□□□ 1.73
SF1-220ENST00000626028 FSCN1Q16658 493 aaKnown RBP25.88■■□□□ 1.73
SF1-220ENST00000626028 ANKRD33Q7Z3H0 272 aa25.88■■□□□ 1.73
SF1-220ENST00000626028 FANCBQ8NB91 859 aa25.88■■□□□ 1.73
SF1-220ENST00000626028 TBC1D5Q92609 795 aa25.88■■□□□ 1.73
SF1-220ENST00000626028 MYADML2A6NDP7 307 aa25.87■■□□□ 1.73
SF1-220ENST00000626028 STXBP2Q15833 593 aa25.87■■□□□ 1.73
SF1-220ENST00000626028 TRIM60Q495X7 471 aa25.87■■□□□ 1.73
SF1-220ENST00000626028 TAAR1Q96RJ0 339 aa25.87■■□□□ 1.73
SF1-220ENST00000626028 MYL10Q9BUA6 226 aa25.87■■□□□ 1.73
SF1-220ENST00000626028 COL20A1Q9P218 1284 aa25.87■■□□□ 1.73
SF1-220ENST00000626028 SEC63Q9UGP8 760 aaKnown RBP25.87■■□□□ 1.73
SF1-220ENST00000626028 SYN1P17600 705 aa25.86■■□□□ 1.73
SF1-220ENST00000626028 COL9A3Q14050 684 aaPredicted RBP25.86■■□□□ 1.73
SF1-220ENST00000626028 PPP2R5BQ15173 497 aa25.86■■□□□ 1.73
SF1-220ENST00000626028 ADCK5Q3MIX3 580 aa25.86■■□□□ 1.73
SF1-220ENST00000626028 ARHGEF16Q5VV41 709 aa25.86■■□□□ 1.73
SF1-220ENST00000626028 PXMP2Q9NR77 195 aa25.86■■□□□ 1.73
SF1-220ENST00000626028 DDX49Q9Y6V7 483 aaKnown RBP25.86■■□□□ 1.73
SF1-220ENST00000626028 DYNC1LI2O43237 492 aaPredicted RBP25.85■■□□□ 1.73
SF1-220ENST00000626028 MAGEA10P43363 369 aaPredicted RBP25.85■■□□□ 1.73
SF1-220ENST00000626028 TTLL4Q14679 1199 aa25.85■■□□□ 1.73
SF1-220ENST00000626028 APOA5Q6Q788 366 aa25.85■■□□□ 1.73
SF1-220ENST00000626028 FBXL16Q8N461 479 aa25.85■■□□□ 1.73
SF1-220ENST00000626028 LBHD1Q9BQE6 289 aaPredicted RBP25.85■■□□□ 1.73
SF1-220ENST00000626028 RBM28Q9NW13 759 aaKnown RBP25.85■■□□□ 1.73
SF1-220ENST00000626028 A0A0U1RQG5 324 aaPredicted RBP25.84■■□□□ 1.73
SF1-220ENST00000626028 GCOM1H8Y6P7 765 aaPredicted RBP25.84■■□□□ 1.73
SF1-220ENST00000626028 EIF3JO75822 258 aaKnown RBP25.84■■□□□ 1.73
SF1-220ENST00000626028 POLR2MP0CAP2 368 aa25.84■■□□□ 1.73
SF1-220ENST00000626028 CPT1AP50416 773 aa25.84■■□□□ 1.73
SF1-220ENST00000626028 TLE2Q04725 743 aa25.84■■□□□ 1.73
SF1-220ENST00000626028 BRDTQ58F21 947 aaPredicted RBP25.84■■□□□ 1.73
SF1-220ENST00000626028 TEX2Q8IWB9 1127 aa25.84■■□□□ 1.73
SF1-220ENST00000626028 SRBD1Q8N5C6 995 aaKnown RBP25.84■■□□□ 1.73
SF1-220ENST00000626028 LRRC2Q9BYS8 371 aa25.84■■□□□ 1.73
SF1-220ENST00000626028 DCDC2CA8MYV0 355 aa25.83■■□□□ 1.73
SF1-220ENST00000626028 PSMA5P28066 241 aa25.83■■□□□ 1.73
SF1-220ENST00000626028 CDK7P50613 346 aa25.83■■□□□ 1.73
SF1-220ENST00000626028 TMTC3Q6ZXV5 915 aa25.83■■□□□ 1.73
SF1-220ENST00000626028 PDLIM7Q9NR12 457 aa25.83■■□□□ 1.73
SF1-220ENST00000626028 SCN10AQ9Y5Y9 1956 aa25.83■■□□□ 1.73
SF1-220ENST00000626028 KPNA6O60684 536 aa25.82■■□□□ 1.72
SF1-220ENST00000626028 NR3C2P08235 984 aa25.82■■□□□ 1.72
SF1-220ENST00000626028 CLTBP09497 229 aa25.82■■□□□ 1.72
SF1-220ENST00000626028 KCNV1Q6PIU1 500 aa25.82■■□□□ 1.72
SF1-220ENST00000626028 MICU3Q86XE3 530 aa25.82■■□□□ 1.72
SF1-220ENST00000626028 POLR3EQ9NVU0 708 aa25.82■■□□□ 1.72
SF1-220ENST00000626028 SNX14Q9Y5W7 946 aa25.82■■□□□ 1.72
SF1-220ENST00000626028 ARVCFO00192 962 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 PIK3CDO00329 1044 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 KIAA0355O15063 1070 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 ZBTB43O43298 467 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 PLEKHA8P1O95397 391 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 TXNP10599 105 aaKnown RBP25.81■■□□□ 1.72
SF1-220ENST00000626028 BEX3Q00994 111 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 CCDC62Q6P9F0 684 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 BLOC1S2Q6QNY1 142 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 VTI1AQ96AJ9 217 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 PDCD2LQ9BRP1 358 aa25.81■■□□□ 1.72
SF1-220ENST00000626028 SLC34A2O95436 690 aa25.8■■□□□ 1.72
SF1-220ENST00000626028 EIF2AK2P19525 551 aaKnown RBP25.8■■□□□ 1.72
SF1-220ENST00000626028 FXR1P51114 621 aaKnown RBP eCLIP25.8■■□□□ 1.72
SF1-220ENST00000626028 IRX5P78411 483 aaPredicted RBP25.8■■□□□ 1.72
SF1-220ENST00000626028 SLC43A3Q8NBI5 491 aa25.8■■□□□ 1.72
SF1-220ENST00000626028 OR6J1Q8NGC5 347 aa25.8■■□□□ 1.72
SF1-220ENST00000626028 JAKMIP1Q96N16 626 aaKnown RBP25.8■■□□□ 1.72
SF1-220ENST00000626028 UBE2OQ9C0C9 1292 aaKnown RBP25.8■■□□□ 1.72
SF1-220ENST00000626028 FRMPD4Q14CM0 1322 aa25.8■■□□□ 1.72
SF1-220ENST00000626028 A6NJR5 290 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 PQBP1O60828 265 aaKnown RBP25.79■■□□□ 1.72
SF1-220ENST00000626028 EIF5BO60841 1220 aaKnown RBP25.79■■□□□ 1.72
SF1-220ENST00000626028 STAM2O75886 525 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 RXRAP19793 462 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 HOXA13P31271 388 aaPredicted RBP25.79■■□□□ 1.72
SF1-220ENST00000626028 FGD1P98174 961 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 RTN1Q16799 776 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 CXCL17Q6UXB2 119 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 VSIG10LQ86VR7 867 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 CUL5Q93034 780 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 BRPF3Q9ULD4 1205 aa25.79■■□□□ 1.72
SF1-220ENST00000626028 CCDC196A0A1B0GTZ2 297 aa25.78■■□□□ 1.72
SF1-220ENST00000626028 TLR3O15455 904 aaKnown RBP25.78■■□□□ 1.72
SF1-220ENST00000626028 TGFB3P10600 412 aa25.78■■□□□ 1.72
SF1-220ENST00000626028 FAAP100Q0VG06 881 aa25.78■■□□□ 1.72
SF1-220ENST00000626028 PGM5Q15124 567 aa25.78■■□□□ 1.72
SF1-220ENST00000626028 TDHQ8IZJ6 230 aa25.78■■□□□ 1.72
SF1-220ENST00000626028 EMID1Q96A84 441 aaPredicted RBP25.78■■□□□ 1.72
SF1-220ENST00000626028 AGXT2Q9BYV1 514 aa25.78■■□□□ 1.72
SF1-220ENST00000626028 PRDM5Q9NQX1 630 aaPredicted RBP25.78■■□□□ 1.72
SF1-220ENST00000626028 GH1P01241 217 aa25.77■■□□□ 1.72
SF1-220ENST00000626028 CCND2P30279 289 aa25.77■■□□□ 1.72
SF1-220ENST00000626028 TMEM63BQ5T3F8 832 aa25.77■■□□□ 1.72
SF1-220ENST00000626028 XRRA1Q6P2D8 792 aa25.77■■□□□ 1.72
SF1-220ENST00000626028 TCEANC2Q96MN5 208 aa25.77■■□□□ 1.72
SF1-220ENST00000626028 USP26Q9BXU7 913 aa25.77■■□□□ 1.72
SF1-220ENST00000626028 TMEM39AQ9NV64 488 aa25.77■■□□□ 1.72
SF1-220ENST00000626028 KLF18A0A0U1RQI7 1052 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 TRIM43BA6NCK2 446 aa25.76■■□□□ 1.71
SF1-220ENST00000626028 hCG_1984214I3L0E3 225 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms