RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 GNG11P61952 73 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 NME8Q8N427 588 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 TRAPPC10P48553 1259 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 PAK1Q13153 545 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 CYP26C1Q6V0L0 522 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 AGBL3Q8NEM8 1001 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 NT5C1BQ96P26 610 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 TRIM56Q9BRZ2 755 aaKnown RBP12.13□□□□□ -0.47
VPS8-227ENST00000625842 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 RNF146Q9NTX7 359 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 ARMCX3Q9UH62 379 aaPredicted RBP12.13□□□□□ -0.47
VPS8-227ENST00000625842 A0A0G2JLW4 131 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 SFNP31947 248 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 TMEM132BQ14DG7 1078 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 PPP2R5EQ16537 467 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 INTS4Q96HW7 963 aaKnown RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 SAMD15Q9P1V8 674 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 MSRAQ9UJ68 235 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 THAP12O43422 761 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 ZNF189O75820 626 aaPredicted RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 C6orf222P0C671 652 aaPredicted RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 CHMLP26374 656 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 PRKCQQ04759 706 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 TSTA3Q13630 321 aaPredicted RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 COG2Q14746 738 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 KIAA1586Q9HCI6 787 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 GH2P01242 217 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■■■■■ 30.9
VPS8-227ENST00000625842 ATXN3P54252 364 aaPredicted RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 MECOMQ03112 1051 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 PTPAQ15257 358 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 MAPK6Q16659 721 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 BZW1Q7L1Q6 419 aaKnown RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 PSPC1Q8WXF1 523 aaKnown RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 RSAD2Q8WXG1 361 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 PAIP2Q9BPZ3 127 aaKnown RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 PPANQ9NQ55 473 aaKnown RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 NKIRAS1Q9NYS0 192 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 USTQ9Y2C2 406 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 ANGPTL3Q9Y5C1 460 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 ERVK-7P63135 1459 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 F13A1P00488 732 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.12□□□□□ -0.47
VPS8-227ENST00000625842 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 CD209Q9NNX6 404 aa12.12□□□□□ -0.47
VPS8-227ENST00000625842 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 PI4K2BG5E9Z4 385 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 K7ERI5 159 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 VAV2P52735 878 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 MFAP3P55082 362 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 RMDN3Q96TC7 470 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
VPS8-227ENST00000625842 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 SGSM2O43147 1006 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 EPHX2P34913 555 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 CPT1AP50416 773 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 CYP2J2P51589 502 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
VPS8-227ENST00000625842 MTERF2Q49AM1 385 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 GBP6Q6ZN66 633 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 DYMQ7RTS9 669 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 C10orf67Q8IYJ2 551 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 RABGGTAQ92696 567 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 AK8Q96MA6 479 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 CTAGE9A4FU28 777 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 KDM1AO60341 852 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 DLATP10515 647 aaKnown RBP12.11□□□□□ -0.47
VPS8-227ENST00000625842 RALAP11233 206 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 PTGS1P23219 599 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 PPFIBP2Q8ND30 876 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 SH3TC2Q8TF17 1288 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 TDRD3Q9H7E2 651 aaKnown RBP12.11□□□□□ -0.47
VPS8-227ENST00000625842 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 IPPQ9Y573 584 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 SLC4A7Q9Y6M7 1214 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 KPNA6O60684 536 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 CPB1P15086 417 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 SNX17Q15036 470 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 RPS6KA2Q15349 733 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 GIMAP6Q6P9H5 292 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 P3H4Q92791 437 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 MED23Q9ULK4 1368 aa12.11□□□□□ -0.47
VPS8-227ENST00000625842 SORBS3O60504 671 aa12.1□□□□□ -0.47
VPS8-227ENST00000625842 TBC1D19Q8N5T2 526 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms