RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 DGKHQ86XP1 1220 aa27.88■■■□□ 2.05
CPSF1-214ENST00000622776 RGS22Q8NE09 1264 aa27.88■■■□□ 2.05
CPSF1-214ENST00000622776 UBA5Q9GZZ9 404 aa27.88■■■□□ 2.05
CPSF1-214ENST00000622776 CPVLQ9H3G5 476 aa27.88■■■□□ 2.05
CPSF1-214ENST00000622776 PCDHA11Q9Y5I1 949 aa27.88■■■□□ 2.05
CPSF1-214ENST00000622776 TXNP10599 105 aaKnown RBP27.87■■■□□ 2.05
CPSF1-214ENST00000622776 CCDC85BQ15834 202 aaPredicted RBP27.87■■■□□ 2.05
CPSF1-214ENST00000622776 NFRKBQ6P4R8 1299 aa27.87■■■□□ 2.05
CPSF1-214ENST00000622776 DEFB128Q7Z7B8 93 aa27.87■■■□□ 2.05
CPSF1-214ENST00000622776 ATXN2LQ8WWM7 1075 aaKnown RBP27.87■■■□□ 2.05
CPSF1-214ENST00000622776 ZNF213O14771 459 aa27.86■■■□□ 2.05
CPSF1-214ENST00000622776 MYOGP15173 224 aa27.86■■■□□ 2.05
CPSF1-214ENST00000622776 ATP2A2P16615 1042 aaKnown RBP27.86■■■□□ 2.05
CPSF1-214ENST00000622776 PPP2R2DQ66LE6 453 aa27.86■■■□□ 2.05
CPSF1-214ENST00000622776 PPP1R13LQ8WUF5 828 aa27.86■■■□□ 2.05
CPSF1-214ENST00000622776 THEGQ9P2T0 379 aa27.86■■■□□ 2.05
CPSF1-214ENST00000622776 ARIH2O95376 493 aa27.85■■■□□ 2.05
CPSF1-214ENST00000622776 CCDC178Q5BJE1 867 aa27.85■■■□□ 2.05
CPSF1-214ENST00000622776 B4GALNT3Q6L9W6 998 aa27.85■■■□□ 2.05
CPSF1-214ENST00000622776 SMC5Q8IY18 1101 aa27.85■■■□□ 2.05
CPSF1-214ENST00000622776 PNMA1Q8ND90 353 aa27.85■■■□□ 2.05
CPSF1-214ENST00000622776 NT5C2P49902 561 aa27.84■■■□□ 2.05
CPSF1-214ENST00000622776 PTPN11Q06124 597 aaPredicted RBP27.84■■■□□ 2.05
CPSF1-214ENST00000622776 IQCA1Q86XH1 822 aa27.84■■■□□ 2.05
CPSF1-214ENST00000622776 TBC1D5Q92609 795 aa27.84■■■□□ 2.05
CPSF1-214ENST00000622776 MAF1Q9H063 256 aa27.84■■■□□ 2.05
CPSF1-214ENST00000622776 SCN5AQ14524 2016 aa27.84■■■□□ 2.05
CPSF1-214ENST00000622776 KDM4AO75164 1064 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 RFC2P35250 354 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 AAMPQ13685 434 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 CDC37Q16543 378 aaPredicted RBP27.83■■■□□ 2.05
CPSF1-214ENST00000622776 CCDC62Q6P9F0 684 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 PLEKHM2Q8IWE5 1019 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 RETREG2Q8NC44 543 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 ANKS1AQ92625 1134 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 RWDD1Q9H446 243 aaPredicted RBP27.83■■■□□ 2.05
CPSF1-214ENST00000622776 KAT14Q9H8E8 782 aa27.83■■■□□ 2.05
CPSF1-214ENST00000622776 PRRC2BQ5JSZ5 2229 aaKnown RBP27.82■■■□□ 2.04
CPSF1-214ENST00000622776 PITPNM1O00562 1244 aa27.82■■■□□ 2.04
CPSF1-214ENST00000622776 ACTN1P12814 892 aa27.82■■■□□ 2.04
CPSF1-214ENST00000622776 CWC27Q6UX04 472 aaKnown RBP27.82■■■□□ 2.04
CPSF1-214ENST00000622776 SYTL5Q8TDW5 730 aaPredicted RBP27.82■■■□□ 2.04
CPSF1-214ENST00000622776 ASB2Q96Q27 587 aa27.82■■■□□ 2.04
CPSF1-214ENST00000622776 TAAR1Q96RJ0 339 aa27.82■■■□□ 2.04
CPSF1-214ENST00000622776 OSBPL3Q9H4L5 887 aa27.82■■■□□ 2.04
CPSF1-214ENST00000622776 ABCB11O95342 1321 aa27.82■■■□□ 2.04
CPSF1-214ENST00000622776 MUC3AQ02505 3323 aa27.81■■■□□ 2.04
CPSF1-214ENST00000622776 TNFRSF10AO00220 468 aa27.81■■■□□ 2.04
CPSF1-214ENST00000622776 IQCF3P0C7M6 154 aa27.81■■■□□ 2.04
CPSF1-214ENST00000622776 CHD1LQ86WJ1 897 aa27.81■■■□□ 2.04
CPSF1-214ENST00000622776 ADGRF4Q8IZF3 695 aa27.81■■■□□ 2.04
CPSF1-214ENST00000622776 BDP1A6H8Y1 2624 aa27.81■■■□□ 2.04
CPSF1-214ENST00000622776 TET1Q8NFU7 2136 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 B4E1Z4 1266 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 MRPS5P82675 430 aaKnown RBP27.8■■■□□ 2.04
CPSF1-214ENST00000622776 BFSP2Q13515 415 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 ASPRV1Q53RT3 343 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 TMEM67Q5HYA8 995 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 SEPT14Q6ZU15 432 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 NSUN6Q8TEA1 469 aaKnown RBP27.8■■■□□ 2.04
CPSF1-214ENST00000622776 AFG1LQ8WV93 481 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 ZSCAN10Q96SZ4 725 aaPredicted RBP27.8■■■□□ 2.04
CPSF1-214ENST00000622776 DIAPH3Q9NSV4 1193 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 COL20A1Q9P218 1284 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 NOD1Q9Y239 953 aa27.8■■■□□ 2.04
CPSF1-214ENST00000622776 GH1P01241 217 aa27.79■■■□□ 2.04
CPSF1-214ENST00000622776 CHMP4BP1P59074 171 aa27.79■■■□□ 2.04
CPSF1-214ENST00000622776 MCF2L2Q86YR7 1114 aa27.79■■■□□ 2.04
CPSF1-214ENST00000622776 ENAHQ8N8S7 591 aaPredicted RBP27.79■■■□□ 2.04
CPSF1-214ENST00000622776 FTOQ9C0B1 505 aaKnown RBP eCLIP27.79■■■□□ 2.04
CPSF1-214ENST00000622776 CA3P07451 260 aa27.78■■■□□ 2.04
CPSF1-214ENST00000622776 LY6KQ17RY6 165 aa27.78■■■□□ 2.04
CPSF1-214ENST00000622776 QRICH1Q2TAL8 776 aa27.78■■■□□ 2.04
CPSF1-214ENST00000622776 IWS1Q96ST2 819 aa27.78■■■□□ 2.04
CPSF1-214ENST00000622776 SLC9A7Q96T83 725 aa27.78■■■□□ 2.04
CPSF1-214ENST00000622776 RMDN3Q96TC7 470 aa27.78■■■□□ 2.04
CPSF1-214ENST00000622776 ZSWIM5Q9P217 1185 aa27.78■■■□□ 2.04
CPSF1-214ENST00000622776 TRIP12Q14669 1992 aaPredicted RBP27.77■■■□□ 2.04
CPSF1-214ENST00000622776 LAMA4Q16363 1823 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 MMP3P08254 477 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 NUCB1Q02818 461 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 ARHGAP1Q07960 439 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 STXBP2Q15833 593 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 FBXO11Q86XK2 927 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 PHOSPHO2Q8TCD6 241 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 DSCC1Q9BVC3 393 aa27.77■■■□□ 2.04
CPSF1-214ENST00000622776 MRPL11Q9Y3B7 192 aaKnown RBP27.77■■■□□ 2.04
CPSF1-214ENST00000622776 HIP1O00291 1037 aa27.76■■■□□ 2.03
CPSF1-214ENST00000622776 DHX16O60231 1041 aaKnown RBP27.76■■■□□ 2.03
CPSF1-214ENST00000622776 IGHDP01880 384 aa27.76■■■□□ 2.03
CPSF1-214ENST00000622776 PARP1P09874 1014 aaKnown RBP27.76■■■□□ 2.03
CPSF1-214ENST00000622776 PTGISQ16647 500 aa27.76■■■□□ 2.03
CPSF1-214ENST00000622776 CHST3Q7LGC8 479 aa27.76■■■□□ 2.03
CPSF1-214ENST00000622776 MICALL1Q8N3F8 863 aa27.76■■■□□ 2.03
CPSF1-214ENST00000622776 JMJD4Q9H9V9 463 aa27.76■■■□□ 2.03
CPSF1-214ENST00000622776 VAT1LQ9HCJ6 419 aa27.76■■■□□ 2.03
CPSF1-214ENST00000622776 IMMTQ16891 758 aaKnown RBP27.75■■■□□ 2.03
CPSF1-214ENST00000622776 SESTD1Q86VW0 696 aa27.75■■■□□ 2.03
CPSF1-214ENST00000622776 ADAMTS19Q8TE59 1207 aa27.75■■■□□ 2.03
CPSF1-214ENST00000622776 KAT2BQ92831 832 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms