RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TNKSO95271 1327 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 WDR19Q8NEZ3 1342 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 EYSQ5T1H1 3165 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 B4E1Z4 1266 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 NKRFO15226 690 aaKnown RBP eCLIP10.91□□□□□ -0.66
TARDBP-227ENST00000622057 DHX16O60231 1041 aaKnown RBP10.91□□□□□ -0.66
TARDBP-227ENST00000622057 AAMPQ13685 434 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 CCDC85BQ15834 202 aaPredicted RBP10.91□□□□□ -0.66
TARDBP-227ENST00000622057 CDC37Q16543 378 aaPredicted RBP10.91□□□□□ -0.66
TARDBP-227ENST00000622057 CCDC178Q5BJE1 867 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 SEPT14Q6ZU15 432 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 ADGRF4Q8IZF3 695 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 SCFD2Q8WU76 684 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 SYMPKQ92797 1274 aaKnown RBP10.91□□□□□ -0.66
TARDBP-227ENST00000622057 TAAR1Q96RJ0 339 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 OSBPL3Q9H4L5 887 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 YBX2Q9Y2T7 364 aaKnown RBP10.91□□□□□ -0.66
TARDBP-227ENST00000622057 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
TARDBP-227ENST00000622057 RAD50Q92878 1312 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 ARIH2O95376 493 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 MYOGP15173 224 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 EDNRBP24530 442 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 NUCB1Q02818 461 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 ADGRE1Q14246 886 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 TTLL4Q14679 1199 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 IMMTQ16891 758 aaKnown RBP10.9□□□□□ -0.66
TARDBP-227ENST00000622057 CHST3Q7LGC8 479 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 RGS22Q8NE09 1264 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 EXOC6Q8TAG9 804 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 ZSCAN10Q96SZ4 725 aaPredicted RBP10.9□□□□□ -0.66
TARDBP-227ENST00000622057 FTOQ9C0B1 505 aaKnown RBP eCLIP10.9□□□□□ -0.66
TARDBP-227ENST00000622057 ZSWIM5Q9P217 1185 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
TARDBP-227ENST00000622057 ABCB11O95342 1321 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 A6NJR5 290 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 HIP1O00291 1037 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 KPNA6O60684 536 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 PARP1P09874 1014 aaKnown RBP10.89□□□□□ -0.67
TARDBP-227ENST00000622057 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
TARDBP-227ENST00000622057 LY6KQ17RY6 165 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 QRICH1Q2TAL8 776 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 ARHGEF16Q5VV41 709 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 FBXO11Q86XK2 927 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 MCF2L2Q86YR7 1114 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 SYTL5Q8TDW5 730 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-227ENST00000622057 ANKS1AQ92625 1134 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 CTNNA3Q9UI47 895 aa10.89□□□□□ -0.67
TARDBP-227ENST00000622057 MRPL11Q9Y3B7 192 aaKnown RBP10.89□□□□□ -0.67
TARDBP-227ENST00000622057 CFBP00751 764 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 GH1P01241 217 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 PFKMP08237 780 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 IQCF3P0C7M6 154 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 ACTN1P12814 892 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 NT5C2P49902 561 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 PTPN11Q06124 597 aaPredicted RBP10.88□□□□□ -0.67
TARDBP-227ENST00000622057 STXBP2Q15833 593 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 ASPRV1Q53RT3 343 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 IFIT1BQ5T764 474 aaKnown RBP10.88□□□□□ -0.67
TARDBP-227ENST00000622057 PPP2R2DQ66LE6 453 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 NFRKBQ6P4R8 1299 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 ENAHQ8N8S7 591 aaPredicted RBP10.88□□□□□ -0.67
TARDBP-227ENST00000622057 NSUN6Q8TEA1 469 aaKnown RBP10.88□□□□□ -0.67
TARDBP-227ENST00000622057 AFG1LQ8WV93 481 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 RMDN3Q96TC7 470 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 UBAC1Q9BSL1 405 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 DSCC1Q9BVC3 393 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 KRT23Q9C075 422 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 COL20A1Q9P218 1284 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 PCDHA11Q9Y5I1 949 aa10.88□□□□□ -0.67
TARDBP-227ENST00000622057 MMP3P08254 477 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 EIF2AK2P19525 551 aaKnown RBP10.87□□□□□ -0.67
TARDBP-227ENST00000622057 CASTP20810 708 aaKnown RBP10.87□□□□□ -0.67
TARDBP-227ENST00000622057 RFC2P35250 354 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 BFSP2Q13515 415 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 PTGISQ16647 500 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 TMEM67Q5HYA8 995 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 CCDC62Q6P9F0 684 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 CNNM2Q9H8M5 875 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 JMJD4Q9H9V9 463 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 CERS4Q9HA82 394 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 PRUNE2Q8WUY3 3088 aa10.87□□□□□ -0.67
TARDBP-227ENST00000622057 VCANP13611 3396 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 KLRF2D3W0D1 207 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 RFXAPO00287 272 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 SORBS3O60504 671 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 MYCLP12524 364 aaPredicted RBP10.86□□□□□ -0.67
TARDBP-227ENST00000622057 GDF6Q6KF10 455 aaPredicted RBP10.86□□□□□ -0.67
TARDBP-227ENST00000622057 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 ATXN2LQ8WWM7 1075 aaKnown RBP10.86□□□□□ -0.67
TARDBP-227ENST00000622057 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 AMNQ9BXJ7 453 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 MAF1Q9H063 256 aa10.86□□□□□ -0.67
TARDBP-227ENST00000622057 THEGQ9P2T0 379 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms