RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 LRRC36Q1X8D7 754 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 TRIM50Q86XT4 487 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 ETNK1Q9HBU6 452 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 CTDSPL2Q05D32 466 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 ANO5Q75V66 913 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 TBC1D23Q9NUY8 699 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 DCTN4Q9UJW0 460 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 NDUFB9Q9Y6M9 179 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 ADCY2Q08462 1091 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 LAMB3Q13751 1172 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 RASSF3Q86WH2 238 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 NEK9Q8TD19 979 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 SKA2Q8WVK7 121 aaPredicted RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 SERPINB3P29508 390 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 PDE6CP51160 858 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 TRAF1Q13077 416 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 CRLF3Q8IUI8 442 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 GFM2Q969S9 779 aaKnown RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 UTP6Q9NYH9 597 aaKnown RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 MTMR6Q9Y217 621 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 CA4P22748 312 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 MUM1L1Q5H9M0 696 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 EIF6P56537 245 aaKnown RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 KLC1Q07866 573 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 NT5C3AQ9H0P0 336 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 DTX3LQ8TDB6 740 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 SLC26A7Q8TE54 656 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 MLH1P40692 756 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 TEX9Q8N6V9 391 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 CNOT6LQ96LI5 555 aaKnown RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 EIF3BP55884 814 aaKnown RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 DDX42Q86XP3 938 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLTC-215ENST00000621829 TTC17Q96AE7 1141 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 CHMP2BQ9UQN3 213 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 CFAP73A6NFT4 308 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 HADHQ16836 314 aaKnown RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 KIF19Q2TAC6 998 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 NHEJ1Q9H9Q4 299 aaPredicted RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 EHD2Q9NZN4 543 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 H2AFZP0C0S5 128 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 HABP4Q5JVS0 413 aaKnown RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 BTNL9Q6UXG8 535 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 C4orf50Q6ZRC1 276 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 H2AFVQ71UI9 128 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 TTC6Q86TZ1 520 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 KIF2CQ99661 725 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 CD248Q9HCU0 757 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 SUCLA2Q9P2R7 463 aaPredicted RBP12.56□□□□□ -0.4
CLTC-215ENST00000621829 ANGPTL3Q9Y5C1 460 aa12.56□□□□□ -0.4
CLTC-215ENST00000621829 ECEL1O95672 775 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 CPP00450 1065 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 TOGARAM2Q6ZUX3 1019 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 ANKLE2Q86XL3 938 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 BATF3Q9NR55 127 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 PANK4Q9NVE7 773 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 EPHB1P54762 984 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 SPARCL1Q14515 664 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 GLE1Q53GS7 698 aaKnown RBP12.55□□□□□ -0.4
CLTC-215ENST00000621829 EPM2AIP1Q7L775 607 aaPredicted RBP12.55□□□□□ -0.4
CLTC-215ENST00000621829 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 STAMBPL1Q96FJ0 436 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 GSDMAQ96QA5 445 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLTC-215ENST00000621829 TRIM55Q9BYV6 548 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 CARD9Q9H257 536 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 INPP5FQ9Y2H2 1132 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 TECP42680 631 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 CNGA3Q16281 694 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 KCNH5Q8NCM2 988 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 DEPDC1BQ8WUY9 529 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 ARMT1Q9H993 441 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.55□□□□□ -0.4
CLTC-215ENST00000621829 DR1Q01658 176 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 RINT1Q6NUQ1 792 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
CLTC-215ENST00000621829 ADCY3O60266 1144 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 E2F6O75461 281 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 GUCY1A3Q02108 690 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 CYP4F11Q9HBI6 524 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 PRPF6O94906 941 aaKnown RBP12.55□□□□□ -0.4
CLTC-215ENST00000621829 MAP4P27816 1152 aaKnown RBP12.55□□□□□ -0.4
CLTC-215ENST00000621829 OCRLQ01968 901 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 RNF207Q6ZRF8 634 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 TUBGCP2Q9BSJ2 902 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 RNPEPQ9H4A4 650 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
CLTC-215ENST00000621829 GEMIN8Q9NWZ8 242 aaKnown RBP12.55□□□□□ -0.4
CLTC-215ENST00000621829 HSPA8P11142 646 aaKnown RBP12.54□□□□□ -0.4
CLTC-215ENST00000621829 BLVRAP53004 296 aa12.54□□□□□ -0.4
CLTC-215ENST00000621829 CCDC195A0A1B0GUA6 201 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms