RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ARID4AP29374 1257 aaPredicted RBP2.89□□□□□ -1.95
CPNE3-211ENST00000621526 PMLP29590 882 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 PLCD1P51178 756 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 TBC1D8BQ0IIM8 1120 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 PTK7Q13308 1070 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 WDR43Q15061 677 aaKnown RBP eCLIP2.89□□□□□ -1.95
CPNE3-211ENST00000621526 PTGISQ16647 500 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 TKFCQ3LXA3 575 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 PLEKHG4Q58EX7 1191 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 TRAF7Q6Q0C0 670 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.89□□□□□ -1.95
CPNE3-211ENST00000621526 TBC1D9Q6ZT07 1266 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 KIAA1211Q6ZU35 1233 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 ZDHHC14Q8IZN3 488 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 DBF4BQ8NFT6 615 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 SPPL3Q8TCT6 385 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 RASGRP4Q8TDF6 673 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 XAGE2Q96GT9 111 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 ZNF512BQ96KM6 892 aaPredicted RBP2.89□□□□□ -1.95
CPNE3-211ENST00000621526 NECTIN4Q96NY8 510 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 CTAGE1Q96RT6 745 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 YME1L1Q96TA2 773 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 INCENPQ9NQS7 918 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 ANKFY1Q9P2R3 1169 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 WNT16Q9UBV4 365 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 SWAP70Q9UH65 585 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 CDV3Q9UKY7 258 aaKnown RBP2.89□□□□□ -1.95
CPNE3-211ENST00000621526 USTQ9Y2C2 406 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 FRYLO94915 3013 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 FANCIQ9NVI1 1328 aa2.89□□□□□ -1.95
CPNE3-211ENST00000621526 BPTFQ12830 3046 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 TMEM8BA6NDV4 472 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 RSPH10B2B2RC85 870 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 TAF4O00268 1085 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SPTLC1O15269 473 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 KINO60870 393 aaKnown RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 LRP3O75074 770 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 CAND2O75155 1236 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 MYL3P08590 195 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 RSPH10BP0C881 870 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SP9P0CG40 484 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SRGAP2BP0DMP2 458 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 ADORA1P30542 326 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 GTF2F1P35269 517 aaKnown RBP eCLIP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 USP5P45974 858 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 ZNF200P98182 395 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 CNTN2Q02246 1040 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 UBE3AQ05086 875 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 ITIH3Q06033 890 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 KCNC3Q14003 757 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 TCTN1Q2MV58 587 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 TRIM71Q2Q1W2 868 aaKnown RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 FAM47CQ5HY64 1035 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 PPM1JQ5JR12 505 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SNRNP48Q6IEG0 339 aaKnown RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 PHLDB3Q6NSJ2 640 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 FAM117BQ6P1L5 589 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SLC4A10Q6U841 1118 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 C1orf210Q8IVY1 113 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 RPAP2Q8IXW5 612 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 MYOCDQ8IZQ8 938 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SPICE1Q8N0Z3 855 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 LRRC47Q8N1G4 583 aaKnown RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 NETO1Q8TDF5 533 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SEPT8Q92599 483 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 APBB2Q92870 758 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 MKL1Q969V6 931 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 ZNF689Q96CS4 500 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 NEK1Q96PY6 1258 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 HINFPQ9BQA5 517 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SLF1Q9BQI6 1058 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 WDR11Q9BZH6 1224 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 MAF1Q9H063 256 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 ADAM7Q9H2U9 754 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 TLE6Q9H808 572 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SLC38A10Q9HBR0 1119 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 GOPCQ9HD26 462 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 GPR108Q9NPR9 543 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 PDGFCQ9NRA1 345 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 FBXO28Q9NVF7 368 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 ADD3Q9UEY8 706 aaKnown RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SAP30BPQ9UHR5 308 aaKnown RBP2.88□□□□□ -1.95
CPNE3-211ENST00000621526 FBXO4Q9UKT5 387 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SYNPO2Q9UMS6 1093 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 COG6Q9Y2V7 657 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 SPTBN2O15020 2390 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 RAD50Q92878 1312 aa2.88□□□□□ -1.95
CPNE3-211ENST00000621526 ZFYVE26Q68DK2 2539 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ZZEF1O43149 2961 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 SMCHD1A6NHR9 2005 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 B4DLN1 442 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 F5H6K3 240 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 MPHOSPH10O00566 681 aaKnown RBP2.87□□□□□ -1.95
CPNE3-211ENST00000621526 ENPP3O14638 875 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 TM4SF5O14894 197 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 PLA2G6O60733 806 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 LILRB5O75023 590 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 PPFIA4O75335 1185 aa2.87□□□□□ -1.95
CPNE3-211ENST00000621526 GLP2RO95838 553 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms