RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SMCO2A6NFE2 343 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 COBLL1Q53SF7 1204 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 SPTY2D1Q68D10 685 aaPredicted RBP22.67■■□□□ 1.22
NEK3-208ENST00000618534 NFRKBQ6P4R8 1299 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 LINC00116Q8NCU8 138 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 SMARCAL1Q9NZC9 954 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 ANKRD65E5RJM6 399 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 KCNQ4P56696 695 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 DIXDC1Q155Q3 683 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 SND1Q7KZF4 910 aaKnown RBP eCLIP22.67■■□□□ 1.22
NEK3-208ENST00000618534 ZNF572Q7Z3I7 529 aaPredicted RBP22.67■■□□□ 1.22
NEK3-208ENST00000618534 POTEDQ86YR6 584 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 IQCDQ96DY2 449 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 RRP36Q96EU6 259 aaKnown RBP22.67■■□□□ 1.22
NEK3-208ENST00000618534 PSMB7Q99436 277 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 DEF6Q9H4E7 631 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 MMRN2Q9H8L6 949 aa22.67■■□□□ 1.22
NEK3-208ENST00000618534 KCNQ2O43526 872 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 RASA1P20936 1047 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 AMOTL1Q8IY63 956 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 SPATA4Q8NEY3 305 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 TGFBRAP1Q8WUH2 860 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 CALML4Q96GE6 196 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 OSBPL9Q96SU4 736 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 LZTS2Q9BRK4 669 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 CDCA7Q9BWT1 371 aaPredicted RBP22.66■■□□□ 1.22
NEK3-208ENST00000618534 SPZ1Q9BXG8 430 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 SAP30BPQ9UHR5 308 aaKnown RBP22.66■■□□□ 1.22
NEK3-208ENST00000618534 MYH10P35580 1976 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 MATR3P43243 847 aaKnown RBP eCLIP22.66■■□□□ 1.22
NEK3-208ENST00000618534 NT5C2P49902 561 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 FAM76AQ8TAV0 307 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 TBCKQ8TEA7 893 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 NLRP3Q96P20 1036 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 C6orf50Q9HD87 102 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 EHD2Q9NZN4 543 aa22.66■■□□□ 1.22
NEK3-208ENST00000618534 GOLGA6CA6NDK9 693 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 MYMKA6NI61 221 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 LRRC53A6NM62 1247 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 LCA5LO95447 670 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 LDHBP07195 334 aaKnown RBP22.65■■□□□ 1.22
NEK3-208ENST00000618534 GOLGA6DP0CG33 693 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 CXCR5P32302 372 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 SLC7A5Q01650 507 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 GRB10Q13322 594 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 BLOC1S4Q9NUP1 217 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 GOLGA6AQ9NYA3 693 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 NAV1Q8NEY1 1877 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 SPATA31A1Q5TZJ5 1347 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 IRS2Q9Y4H2 1338 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 AKR1B10O60218 316 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 TXKP42681 527 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 ITIH3Q06033 890 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 GRIK5Q16478 980 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 SV2BQ7L1I2 683 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 RRAGAQ7L523 313 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 SLC51AQ86UW1 340 aa22.65■■□□□ 1.22
NEK3-208ENST00000618534 SHOX2O60902 331 aaPredicted RBP22.64■■□□□ 1.21
NEK3-208ENST00000618534 PRLRP16471 622 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 ERCC3P19447 782 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 ATP2B2Q01814 1243 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 MAN2A1Q16706 1144 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 USP17L2Q6R6M4 530 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 DYMQ7RTS9 669 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 MAPKAPK5Q8IW41 473 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 SALL4Q9UJQ4 1053 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 HYOU1Q9Y4L1 999 aa22.64■■□□□ 1.21
NEK3-208ENST00000618534 NCK2O43639 380 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 GNA11P29992 359 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 MAGEA9P43362 315 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 ALS2CR12Q96Q35 445 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 VAT1LQ9HCJ6 419 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 TMEM260Q9NX78 707 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 BIN2Q9UBW5 565 aaPredicted RBP22.63■■□□□ 1.21
NEK3-208ENST00000618534 CORO7P57737 925 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 SKIDA1Q1XH10 827 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 UNC13DQ70J99 1090 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 ANKRD13CQ8N6S4 541 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 PNMA5Q96PV4 448 aa22.63■■□□□ 1.21
NEK3-208ENST00000618534 TCP1P17987 556 aaKnown RBP22.62■■□□□ 1.21
NEK3-208ENST00000618534 SOGA3Q5TF21 947 aa22.62■■□□□ 1.21
NEK3-208ENST00000618534 BAP1Q92560 729 aa22.62■■□□□ 1.21
NEK3-208ENST00000618534 SNED1Q8TER0 1413 aa22.62■■□□□ 1.21
NEK3-208ENST00000618534 CCDC181Q5TID7 509 aa22.62■■□□□ 1.21
NEK3-208ENST00000618534 HAUS3Q68CZ6 603 aa22.62■■□□□ 1.21
NEK3-208ENST00000618534 MAGEA1P43355 309 aa22.61■■□□□ 1.21
NEK3-208ENST00000618534 CCDC84Q86UT8 332 aaPredicted RBP22.61■■□□□ 1.21
NEK3-208ENST00000618534 NBPF5PQ86XG9 351 aaPredicted RBP22.61■■□□□ 1.21
NEK3-208ENST00000618534 REXO1Q8N1G1 1221 aaKnown RBP22.61■■□□□ 1.21
NEK3-208ENST00000618534 RUBCNQ92622 972 aa22.61■■□□□ 1.21
NEK3-208ENST00000618534 PIGSQ96S52 555 aa22.61■■□□□ 1.21
NEK3-208ENST00000618534 SEC63Q9UGP8 760 aaKnown RBP22.61■■□□□ 1.21
NEK3-208ENST00000618534 GUF1Q8N442 669 aaKnown RBP22.61■■□□□ 1.21
NEK3-208ENST00000618534 LARP4BQ92615 738 aaKnown RBP22.61■■□□□ 1.21
NEK3-208ENST00000618534 PVALEFA0A1B0GWK0 134 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 BAG3O95817 575 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 GFPT1Q06210 699 aaPredicted RBP22.6■■□□□ 1.21
NEK3-208ENST00000618534 LRRC55Q6ZSA7 311 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 CCDC155Q8N6L0 562 aa22.6■■□□□ 1.21
NEK3-208ENST00000618534 TSEN2Q8NCE0 465 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms