RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TNKSO95271 1327 aa10.07□□□□□ -0.8
GPC6-202ENST00000617456 BRWD1Q9NSI6 2320 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 MYH7P12883 1935 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 PLIN4Q96Q06 1357 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 PLA2G6O60733 806 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 PFKMP08237 780 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 SUPT20HL2P0C7V6 817 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 IRX6P78412 446 aaPredicted RBP10.06□□□□□ -0.8
GPC6-202ENST00000617456 TFAP4Q01664 338 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 ALX1Q15699 326 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 TSHZ3Q63HK5 1081 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 FSD1Q9BTV5 496 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 WDR11Q9BZH6 1224 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 RWDD1Q9H446 243 aaPredicted RBP10.06□□□□□ -0.8
GPC6-202ENST00000617456 VTA1Q9NP79 307 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
GPC6-202ENST00000617456 CYP39A1Q9NYL5 469 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 ANAPC4Q9UJX5 808 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 COG5Q9UP83 839 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 Q9Y3F1 56 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
GPC6-202ENST00000617456 M0R2C6 588 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 TLL1O43897 1013 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 FGRP09769 529 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
GPC6-202ENST00000617456 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
GPC6-202ENST00000617456 PDE1AP54750 535 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 TAP1Q03518 808 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 GRB10Q13322 594 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 ANKRD45Q5TZF3 282 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 RASGRP2Q7LDG7 609 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 SPRED2Q7Z698 418 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 SMC5Q8IY18 1101 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 SMAP1Q8IYB5 467 aaPredicted RBP10.05□□□□□ -0.8
GPC6-202ENST00000617456 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 OR6J1Q8NGC5 347 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 ZNF592Q92610 1267 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 KHSRPQ92945 711 aaKnown RBP eCLIP10.05□□□□□ -0.8
GPC6-202ENST00000617456 HLA-CQ95604 372 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 NAPBQ9H115 298 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 KCNG1Q9UIX4 513 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 CCPG1Q9ULG6 757 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 TRANK1O15050 2925 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 ZMYM6O95789 1325 aa10.05□□□□□ -0.8
GPC6-202ENST00000617456 SCN5AQ14524 2016 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 KIF28PB7ZC32 967 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 POU3F3P20264 500 aaPredicted RBP10.04□□□□□ -0.8
GPC6-202ENST00000617456 NOVP48745 357 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
GPC6-202ENST00000617456 PURAQ00577 322 aaKnown RBP10.04□□□□□ -0.8
GPC6-202ENST00000617456 BAATQ14032 418 aaPredicted RBP10.04□□□□□ -0.8
GPC6-202ENST00000617456 CCDC96Q2M329 555 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 RCSD1Q6JBY9 416 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 HERC6Q8IVU3 1022 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 GMCL1Q96IK5 515 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
GPC6-202ENST00000617456 TMEM51Q9NW97 253 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 PRR12Q9ULL5 1215 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 STX8Q9UNK0 236 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 NOD1Q9Y239 953 aa10.04□□□□□ -0.8
GPC6-202ENST00000617456 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 LRRC37A2A6NM11 1700 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 ORC4O43929 436 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 NMT2O60551 498 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 IQCF3P0C7M6 154 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 RFC2P35250 354 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 CPT1AP50416 773 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 ALDH5A1P51649 535 aaPredicted RBP10.03□□□□□ -0.8
GPC6-202ENST00000617456 PPARAQ07869 468 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 BRDTQ58F21 947 aaPredicted RBP10.03□□□□□ -0.8
GPC6-202ENST00000617456 TMCO2Q7Z6W1 182 aaPredicted RBP10.03□□□□□ -0.8
GPC6-202ENST00000617456 PLCD3Q8N3E9 789 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 PHOSPHO2Q8TCD6 241 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 GDPD5Q8WTR4 605 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 COPS5Q92905 334 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 CRBNQ96SW2 442 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 BRPF3Q9ULD4 1205 aa10.03□□□□□ -0.8
GPC6-202ENST00000617456 LCHNA4D1U4 455 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 TSPY2A6NKD2 308 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 RBAK-RBAKDNI3L0D1 243 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 NFIBO00712 420 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 ICAM1P05362 532 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 CALML3P27482 149 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 SLC16A2P36021 539 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 KCNJ6P48051 423 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 CTDSPL2Q05D32 466 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 TTBK2Q6IQ55 1244 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 TET1Q8NFU7 2136 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 MORC4Q8TE76 937 aa10.02□□□□□ -0.81
GPC6-202ENST00000617456 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms