RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MTMR9Q96QG7 549 aa8.8□□□□□ -1
NEK3-207ENST00000617054 ANO3Q9BYT9 981 aa8.8□□□□□ -1
NEK3-207ENST00000617054 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
NEK3-207ENST00000617054 SAMSN1Q9NSI8 373 aaKnown RBP8.8□□□□□ -1
NEK3-207ENST00000617054 CCDC39Q9UFE4 941 aa8.8□□□□□ -1
NEK3-207ENST00000617054 MYH7BA7E2Y1 1941 aa8.8□□□□□ -1
NEK3-207ENST00000617054 BRCA2P51587 3418 aa8.8□□□□□ -1
NEK3-207ENST00000617054 PEX10O60683 326 aa8.79□□□□□ -1
NEK3-207ENST00000617054 TNFAIP1Q13829 316 aa8.79□□□□□ -1
NEK3-207ENST00000617054 MORC3Q14149 939 aa8.79□□□□□ -1
NEK3-207ENST00000617054 TANGO6Q9C0B7 1094 aa8.79□□□□□ -1
NEK3-207ENST00000617054 XPO4Q9C0E2 1151 aaKnown RBP8.79□□□□□ -1
NEK3-207ENST00000617054 LRWD1Q9UFC0 647 aa8.79□□□□□ -1
NEK3-207ENST00000617054 HOOK1Q9UJC3 728 aaKnown RBP8.79□□□□□ -1
NEK3-207ENST00000617054 GDAQ9Y2T3 454 aa8.79□□□□□ -1
NEK3-207ENST00000617054 FAM86B1E9PN63 330 aa8.79□□□□□ -1
NEK3-207ENST00000617054 FAM86B2P0C5J1 330 aa8.79□□□□□ -1
NEK3-207ENST00000617054 FECHP22830 423 aa8.79□□□□□ -1
NEK3-207ENST00000617054 FAM43AQ8N2R8 423 aa8.79□□□□□ -1
NEK3-207ENST00000617054 NAP1L5Q96NT1 182 aaPredicted RBP8.79□□□□□ -1
NEK3-207ENST00000617054 PURBQ96QR8 312 aaKnown RBP8.79□□□□□ -1
NEK3-207ENST00000617054 POLD4Q9HCU8 107 aa8.79□□□□□ -1
NEK3-207ENST00000617054 ZHX2Q9Y6X8 837 aa8.79□□□□□ -1
NEK3-207ENST00000617054 LTBP3Q9NS15 1303 aa8.79□□□□□ -1
NEK3-207ENST00000617054 hCG_1984214I3L0E3 225 aa8.79□□□□□ -1
NEK3-207ENST00000617054 TXLNAP40222 546 aa8.79□□□□□ -1
NEK3-207ENST00000617054 NT5DC1Q5TFE4 455 aa8.79□□□□□ -1
NEK3-207ENST00000617054 KCNK18Q7Z418 384 aa8.79□□□□□ -1
NEK3-207ENST00000617054 ZNF713Q8N859 430 aaPredicted RBP8.79□□□□□ -1
NEK3-207ENST00000617054 SPDYE3A6NKU9 549 aa8.78□□□□□ -1
NEK3-207ENST00000617054 MAP3K10Q02779 954 aa8.78□□□□□ -1
NEK3-207ENST00000617054 GOLGA8FQ08AF8 430 aa8.78□□□□□ -1
NEK3-207ENST00000617054 RAD51AP2Q09MP3 1159 aa8.78□□□□□ -1
NEK3-207ENST00000617054 GOLGA8DPQ0D2H9 430 aa8.78□□□□□ -1
NEK3-207ENST00000617054 KANK3Q6NY19 840 aa8.78□□□□□ -1
NEK3-207ENST00000617054 BTNL9Q6UXG8 535 aa8.78□□□□□ -1
NEK3-207ENST00000617054 DYMQ7RTS9 669 aa8.78□□□□□ -1
NEK3-207ENST00000617054 SPATA20Q8TB22 786 aa8.78□□□□□ -1
NEK3-207ENST00000617054 RAVER2Q9HCJ3 691 aaKnown RBP8.78□□□□□ -1
NEK3-207ENST00000617054 PCDHA12Q9UN75 941 aa8.78□□□□□ -1
NEK3-207ENST00000617054 ZKSCAN5Q9Y2L8 839 aa8.78□□□□□ -1
NEK3-207ENST00000617054 NFE2L3Q9Y4A8 694 aa8.78□□□□□ -1
NEK3-207ENST00000617054 ADM5C9JUS6 153 aa8.78□□□□□ -1
NEK3-207ENST00000617054 FLOT1O75955 427 aa8.78□□□□□ -1
NEK3-207ENST00000617054 CAVIN2O95810 425 aa8.78□□□□□ -1
NEK3-207ENST00000617054 SERPINC1P01008 464 aa8.78□□□□□ -1
NEK3-207ENST00000617054 HMGCS2P54868 508 aa8.78□□□□□ -1
NEK3-207ENST00000617054 ARHGAP4P98171 946 aa8.78□□□□□ -1
NEK3-207ENST00000617054 MYL5Q02045 173 aa8.78□□□□□ -1
NEK3-207ENST00000617054 LDHDQ86WU2 507 aa8.78□□□□□ -1
NEK3-207ENST00000617054 GPC2Q8N158 579 aa8.78□□□□□ -1
NEK3-207ENST00000617054 EMILIN3Q9NT22 766 aa8.78□□□□□ -1
NEK3-207ENST00000617054 PYCARDQ9ULZ3 195 aa8.78□□□□□ -1
NEK3-207ENST00000617054 COL2A1P02458 1487 aaPredicted RBP8.78□□□□□ -1
NEK3-207ENST00000617054 FANCCQ00597 558 aa8.78□□□□□ -1
NEK3-207ENST00000617054 MCM6Q14566 821 aa8.78□□□□□ -1
NEK3-207ENST00000617054 C9orf131Q5VYM1 1079 aa8.78□□□□□ -1
NEK3-207ENST00000617054 MOB2Q70IA6 237 aa8.78□□□□□ -1
NEK3-207ENST00000617054 IGSF22Q8N9C0 903 aa8.78□□□□□ -1
NEK3-207ENST00000617054 PKD2L1Q9P0L9 805 aa8.78□□□□□ -1
NEK3-207ENST00000617054 NFIBO00712 420 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 CTNND1O60716 968 aaKnown RBP8.77□□□□□ -1.01
NEK3-207ENST00000617054 RPN1P04843 607 aaKnown RBP8.77□□□□□ -1.01
NEK3-207ENST00000617054 CDK11BP21127 795 aaKnown RBP8.77□□□□□ -1.01
NEK3-207ENST00000617054 PRPHP41219 470 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 CACNB1Q02641 598 aaPredicted RBP8.77□□□□□ -1.01
NEK3-207ENST00000617054 GRB10Q13322 594 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 SNX29Q8TEQ0 813 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 CHURC1Q8WUH1 139 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 CTNND2Q9UQB3 1225 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 TRIM49BA6NDI0 452 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 PPP1R3GB7ZBB8 358 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 MEIS1O00470 390 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 LAD1O00515 517 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 SSBP05455 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
NEK3-207ENST00000617054 FCER1AP12319 257 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 ALAS1P13196 640 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 VCAM1P19320 739 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 ZNF76P36508 570 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 PPP4R3AQ6IN85 833 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 TRMT1LQ7Z2T5 733 aaKnown RBP8.77□□□□□ -1.01
NEK3-207ENST00000617054 HOOK2Q96ED9 719 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 PNMA5Q96PV4 448 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 RPAP3Q9H6T3 665 aaPredicted RBP8.77□□□□□ -1.01
NEK3-207ENST00000617054 CCPG1Q9ULG6 757 aa8.77□□□□□ -1.01
NEK3-207ENST00000617054 SMTNL1A8MU46 457 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 ERCC3P19447 782 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 PRCPP42785 496 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 UBASH3AP57075 661 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 KMT5BQ4FZB7 885 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 TMC6Q7Z403 805 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 CACTINQ8WUQ7 758 aaKnown RBP8.76□□□□□ -1.01
NEK3-207ENST00000617054 BPIFA3Q9BQP9 254 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 CCSER1Q9C0I3 900 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 RANBP17Q9H2T7 1088 aaKnown RBP8.76□□□□□ -1.01
NEK3-207ENST00000617054 MORC2Q9Y6X9 1032 aaPredicted RBP8.76□□□□□ -1.01
NEK3-207ENST00000617054 ZNF536O15090 1300 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 ARFGEF1Q9Y6D6 1849 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms