RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 OIP5O43482 229 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ATP8B1O43520 1251 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CEP104O60308 925 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SNX2O60749 519 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SCGB1D2O95969 90 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 HALP42357 657 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 POLD2P49005 469 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SCNN1BP51168 640 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 HSD17B7P56937 341 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PLIN5Q00G26 463 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ACAP1Q15027 740 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SF3B3Q15393 1217 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PKN2Q16513 984 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PROSER3Q2NL68 480 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PABPC1LQ4VXU2 614 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 BEND6Q5SZJ8 279 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 KAZNQ674X7 775 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 THOC7Q6I9Y2 204 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 HIBCHQ6NVY1 386 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CATSPER4Q7RTX7 472 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 GLYCTKQ8IVS8 523 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CEP57L1Q8IYX8 460 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ZNF713Q8N859 430 aaPredicted RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 SPC24Q8NBT2 197 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 FLCNQ8NFG4 579 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 EXOC6Q8TAG9 804 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 GPKOWQ92917 476 aaPredicted RBP eCLIP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 PPP2R3CQ969Q6 453 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 XAGE2Q96GT9 111 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 NEK1Q96PY6 1258 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 HAUS7Q99871 368 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 AP1M1Q9BXS5 423 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CLK4Q9HAZ1 481 aaKnown RBP3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CYLDQ9NQC7 956 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 BATF3Q9NR55 127 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ST7Q9NRC1 585 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 CCPG1Q9ULG6 757 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 RIMKLBQ9ULI2 386 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 TRAF3IP3Q9Y228 551 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 C2CD2Q9Y426 696 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 MRFAP1Q9Y605 127 aa3.39□□□□□ -1.87
CBWD3-209ENST00000614377 ROCK2O75116 1388 aaKnown RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 FAM177BA6PVY3 158 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 SHISA8B8ZZ34 492 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 GOLGA6L19H0YKK7 550 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 MEN1O00255 615 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 MCF2LO15068 1137 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 PCP11498 1178 aaKnown RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 EPB42P16452 691 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ATP5JP18859 108 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 GCKP35557 465 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ACTN2P35609 894 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 CDKN1CP49918 316 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 PSMD7P51665 324 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 OXCT1P55809 520 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 TUBA1BP68363 451 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 CDK17Q00537 523 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 HNRNPUQ00839 825 aaKnown RBP eCLIP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 GUCY1B3Q02153 619 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 MRPL28Q13084 256 aaKnown RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 MOGSQ13724 837 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 DPYSQ14117 519 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 BCL2A1Q16548 175 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 FBXO31Q5XUX0 539 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ADALQ6DHV7 355 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 SLC4A10Q6U841 1118 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 TBC1D9Q6ZT07 1266 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 NCCRP1Q6ZVX7 275 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 TUBA1AQ71U36 451 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 TMC6Q7Z403 805 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 KIAA1328Q86T90 577 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 OSTM1Q86WC4 334 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 RNF168Q8IYW5 571 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 KDF1Q8NAX2 398 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 MAGEC3Q8TD91 643 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 USP6NLQ92738 828 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC114Q96M63 670 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ALS2CR12Q96Q35 445 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ALPK1Q96QP1 1244 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 CNNM2Q9H8M5 875 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ARGLU1Q9NWB6 273 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ZC3H7BQ9UGR2 993 aaKnown RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 FBXO10Q9UK96 956 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 SPG7Q9UQ90 795 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 FHOD1Q9Y613 1164 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ITIH6Q6UXX5 1313 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 A0A1B0GUA9 196 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 FAM196BA6NMK8 535 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 H3BRB1 525 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 TMCC2O75069 709 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 CNOT4O95628 575 aaKnown RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 PAHP00439 452 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 PENKP01210 267 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 P4HBP07237 508 aaKnown RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 GLULP15104 373 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 ZFXP17010 805 aaPredicted RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 CTNNA1P35221 906 aaKnown RBP3.38□□□□□ -1.87
CBWD3-209ENST00000614377 CCT5P48643 541 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 AMPHP49418 695 aa3.38□□□□□ -1.87
CBWD3-209ENST00000614377 RCAN1P53805 252 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms