RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KIF28PB7ZC32 967 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 F13A1P00488 732 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 CTGFP29279 349 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 MAP2K5Q13163 448 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 CD99L2Q8TCZ2 262 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 IWS1Q96ST2 819 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 ARHGAP39Q9C0H5 1083 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 PXMP2Q9NR77 195 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
CD48-203ENST00000613788 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 COBLO75128 1261 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 SREBF1P36956 1147 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 RGS2P41220 211 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 RESTQ13127 1097 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.28
CD48-203ENST00000613788 ZNF792Q3KQV3 632 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.28
CD48-203ENST00000613788 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.28
CD48-203ENST00000613788 PGBD1Q96JS3 809 aa16.77■□□□□ 0.28
CD48-203ENST00000613788 PURBQ96QR8 312 aaKnown RBP16.77■□□□□ 0.28
CD48-203ENST00000613788 NOL7Q9UMY1 257 aaKnown RBP16.77■□□□□ 0.28
CD48-203ENST00000613788 PCNTO95613 3336 aa16.77■□□□□ 0.27
CD48-203ENST00000613788 SOWAHBA6NEL2 793 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 HOXC6P09630 235 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 USP11P51784 963 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 XRRA1Q6P2D8 792 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 ZNF467Q7Z7K2 595 aaPredicted RBP16.76■□□□□ 0.27
CD48-203ENST00000613788 USP6NLQ92738 828 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 ZDHHC9Q9Y397 364 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 RPTORQ8N122 1335 aa16.76■□□□□ 0.27
CD48-203ENST00000613788 ASB14A6NK59 587 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 EIF2AK2P19525 551 aaKnown RBP16.75■□□□□ 0.27
CD48-203ENST00000613788 TRAPPC10P48553 1259 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 ALDH5A1P51649 535 aaPredicted RBP16.75■□□□□ 0.27
CD48-203ENST00000613788 ARHGAP4P98171 946 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 PGM5Q15124 567 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 INF2Q27J81 1249 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 RILPL1Q5EBL4 403 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 EARS2Q5JPH6 523 aaKnown RBP16.75■□□□□ 0.27
CD48-203ENST00000613788 NEK8Q86SG6 692 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 NAP1L4Q99733 375 aaKnown RBP16.75■□□□□ 0.27
CD48-203ENST00000613788 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 FRMPD4Q14CM0 1322 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 NR3C2P08235 984 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 CYP3A4P08684 503 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 XRCC5P13010 732 aaKnown RBP16.75■□□□□ 0.27
CD48-203ENST00000613788 FLT3LGP49771 235 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 PRMT2P55345 433 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 PCNX4Q63HM2 1172 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 MSL3Q8N5Y2 521 aaKnown RBP16.75■□□□□ 0.27
CD48-203ENST00000613788 MAML3Q96JK9 1138 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 APBA2Q99767 749 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 SRRDQ9UH36 339 aa16.75■□□□□ 0.27
CD48-203ENST00000613788 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
CD48-203ENST00000613788 FAM205CA6NFA0 338 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 HSPA1AP0DMV8 641 aaKnown RBP16.74■□□□□ 0.27
CD48-203ENST00000613788 HSPA1BP0DMV9 641 aaKnown RBP16.74■□□□□ 0.27
CD48-203ENST00000613788 MYCLP12524 364 aaPredicted RBP16.74■□□□□ 0.27
CD48-203ENST00000613788 CYP2B6P20813 491 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 CCND2P30279 289 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 ZNF76P36508 570 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 UBXN2AP68543 259 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 PDE4DQ08499 809 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 STXBP2Q15833 593 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 VSIG10LQ86VR7 867 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 NPLOC4Q8TAT6 608 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
CD48-203ENST00000613788 PLXNB2O15031 1838 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 FOXN1O15353 648 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 STAM2O75886 525 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 ATP2B1P20020 1258 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 EDNRBP24530 442 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 CTCFP49711 727 aaPredicted RBP16.73■□□□□ 0.27
CD48-203ENST00000613788 PRKCZQ05513 592 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 LETM2Q2VYF4 491 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 MAMDC4Q6UXC1 1216 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 TRMT44Q8IYL2 757 aaKnown RBP16.73■□□□□ 0.27
CD48-203ENST00000613788 FGD4Q96M96 766 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 ZNF396Q96N95 335 aaPredicted RBP16.73■□□□□ 0.27
CD48-203ENST00000613788 GABRQQ9UN88 632 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 ASTN1O14525 1302 aa16.73■□□□□ 0.27
CD48-203ENST00000613788 ZNF236Q9UL36 1845 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
CD48-203ENST00000613788 HSPA8P11142 646 aaKnown RBP16.72■□□□□ 0.27
CD48-203ENST00000613788 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
CD48-203ENST00000613788 CIITAP33076 1130 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 CAP1Q01518 475 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 IRF5Q13568 498 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 OLFML2BQ68BL8 750 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 ATL3Q6DD88 541 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 PPP4R3AQ6IN85 833 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 MOXD1Q6UVY6 613 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 MORC4Q8TE76 937 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 TINF2Q9BSI4 451 aa16.72■□□□□ 0.27
CD48-203ENST00000613788 CYP3A7-CYP3A51PA0A087WV96 503 aa16.71■□□□□ 0.27
CD48-203ENST00000613788 CCNT1O60563 726 aaKnown RBP16.71■□□□□ 0.27
CD48-203ENST00000613788 CYP3A7P24462 503 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms